UFO05249.5prime Sequence
1115 bp (1001 high quality bases) assembled on 2009-07-06
> UFO05249.5prime
CAGTCGACATGGTTCTGCTACTGGTGCACCTGCGGCGCCTTATTTTGCTG
CTGACGGTCGTTTACCTGAGCGGAGCGGTATTCCGTCGCCTTCTCACCGA
ACGGCACCACGCCCACATCCTGCAAGGCAATGGTTACATGGGTTTCGGAC
GTCTTCGTGGTGGCGGTGGATCCAAGGAGCCGTATCACTTCCAATGGTGG
GCCTACATCTACACCTGTTATGCATACGCCGTGCTGGTCAACTACGTCAA
CATGCGCCGGCTGACCAACCTTATCGAATTTTTCTTGAATGCAAGCTTTC
TAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAAT
CATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACT
AGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTC
TGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGG
AGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGC
AGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAA
ACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTG
CGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATAT
TGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAG
ACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTC
ACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAAT
CGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGG
AAAACGGTGTAACAAGGTGAACACTATCCCATATCACCAGCTCACGTCTT
TCATTGCCATACGAAATTCCGGATGAGCATTCATCAGGCGGCAGATTGTG
AATAGCCGATAAACTTGTGCTTATTTTTTCTTACGTCTTAAAGTCGTAAT
ATCAGCTGACGGTTGATTATAGGTAACTGAGCACTGAACTGGAATGCCCT
AGTTCTTACCGAGTC
UFO05249.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13306-RA | 531 | CG13306-RA | 111..392 | 9..290 | 1410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8749278..8749559 | 290..9 | 1410 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:45:21 has no hits.
UFO05249.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:42 Download gff for
UFO05249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13306-RA | 111..400 | 9..298 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:08 Download gff for
UFO05249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13306-RA | 111..400 | 9..298 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:11 Download gff for
UFO05249.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13306-RA | 111..400 | 9..298 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 21:17:11 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:53:08 has no hits.
