UFO05251.5prime Sequence
1132 bp (1020 high quality bases) assembled on 2009-07-06
> UFO05251.5prime
CAGTCGACATGCATAAGAACTTCAAAAGTCTGCAAAACACTAACCCATCC
AATATGAAGAAGGCCAAAACCGCGGCTAAGGGATTTCCCATTCACCTTGG
TTTTTATAGGAACCCCAGCGAGTATGACGATCGCACGACCACCAATCGCG
ATTATGGATTGAAAAGTTCCAAGGGTTCTGGAACGCCATTTCCGCAAAAA
CAAAAGAAATTAGATACGGCGGCACTAACGGCCAAGTTGGAGACGGATAG
TCTGCTCCGATCTGAATTAAGCGACTTATCGATTGTCATCTCCGAAAGAA
AGGCGTCCTCAGAACCACAAGTGGCATCCAATACTACAACCGAACCAACG
TTTGAGATGAGACGAAAGCTTTTTGACGAGGCCGAGTTCACCATCTGCAA
GGGTCACAAACTGAACCAGGACTTCCATCATATAGTCGAAGATGAAAAGC
ATTTTAACAAAAGGCAGAGTGCCAAGGATAACATTCCCTATAGCAATTTC
ATGGATCTGAAGAACTTCTGCGACCAGAACAACATAAAATTTTCCAAGGG
TTTTGACGGTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGG
TAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCT
AGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGC
CCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCA
TTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGC
CCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGC
CGACATGGAAGCCATCACAAACGGCATGATGAACCTGATCGCCAGCGGCA
TCAGCACCTTGTCGCCTTGCGTATATATTTGCCCATGGTGAAACGGGGGC
GAGAGTTGTCATATTGGCCACGTTTAATCAAAACTGGTGAACTCACCCAG
GGATGGCTGAAACCAAAAAACAAATCTCATAAACCCTTTAGAAATAGCCA
GGGTTCACCGGTACACCGCCCAATCTGCAATATATGTGTAGAACTGCCGG
AAATCGTCTGATCCTTCCGAGCGATGAAACGT
UFO05251.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| I-t-RA | 887 | CG14719-RA | 44..595 | 9..560 | 2760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11704073..11704624 | 9..560 | 2760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:32:21 has no hits.
UFO05251.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:44 Download gff for
UFO05251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| I-t-RA | 446..1010 | 1..571 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:05:41 Download gff for
UFO05251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| I-t-RA | 40..604 | 1..571 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:20 Download gff for
UFO05251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| I-t-RA | 40..604 | 1..571 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:20 Download gff for
UFO05251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11704069..11704624 | 1..560 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:05:41 Download gff for
UFO05251.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7529791..7530346 | 1..560 | 99 | == | Plus |
