UFO05265.5prime Sequence
1071 bp (972 high quality bases) assembled on 2009-07-06
> UFO05265.5prime
CAGTCGACATGCGTAAGATGCAAGTTCTAGTTCAGACGAGCGACGGCAAG
AAGACGGTTTACGATGTGGATCGCTTCGGAACGGTGGCCAACCTGAAGGC
ACGGATCGGGCGAGCCATGTCCGTGCCCATGGGCTTCAGTCGGCTGTCCT
ACAAGGGTCGCGAGCTGTCCAATCAGAGCATACTGGAGGATGTGGGCCAT
AAGTCCATTCTGGATCTCACCTGGAAGCCGGTCGTCCTGACGCCCAAGCA
ATTGCGCGAAAAGAAGATTGGCAAGTTTAGCAAGTTCGGCTATGGCAGGA
AAAACGATAGTGGTGAACATATGTCTACATTGATCGGCGGTTACCAGCAA
CGCATATGTCTGGAAAGTGACGATGATGAACTGGAGGCACAGGACTTGAC
TGAACTCGATTTGTTGTCCCTTAACTCCGATGATTCACTGGTCAACAACC
AGACGGAGCTAGAGCCGATTGCTCCATTGAATTTCTCTGGATCTGATGCA
AGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAA
TCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGT
CATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCG
AGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTAT
CAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCAC
TCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCC
ATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGT
CGCCTTGCGTATATATTTGCCCATGTGAAACGGGGGCGAGAGTTGTCATA
TTGCCACGTTTAATCAAACTGTGAACTCACCAGGATTGCTGAACGAAAAC
ATATCTCATAACCCTTAGAATAGCAGTTCACGTACCGCCATCTGCAATAT
ATGTGTAGACTGCGAATCGTCTGATTCATCGAGCAAGAACGTCAGTTGCC
ATGAAACGGGTACAGTACCAT
UFO05265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:36:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12725-RA | 1025 | CG12725-RA | 150..638 | 9..497 | 2415 | 99.6 | Plus |
| CG33223-RB | 689 | CG33223-RB | 67..396 | 9..353 | 900 | 85.1 | Plus |
| CG33223-RA | 1114 | CG33223-RA | 492..821 | 9..353 | 900 | 85.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:36:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13402226..13402714 | 497..9 | 2415 | 99.6 | Minus |
| X | 23542271 | X | 8465983..8466312 | 353..9 | 810 | 84.2 | Minus |
| X | 23542271 | X | 8457319..8457560 | 247..9 | 800 | 89.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:36:05 has no hits.
UFO05265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:50 Download gff for
UFO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12725-RA | 1..492 | 9..501 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:08:17 Download gff for
UFO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12725-RA | 150..642 | 9..502 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:34 Download gff for
UFO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12725-RA | 150..642 | 9..502 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:34 Download gff for
UFO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13402226..13402714 | 9..497 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:08:17 Download gff for
UFO05265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13296259..13296747 | 9..497 | 99 | | Minus |
