UFO05275.5prime Sequence
1127 bp (1013 high quality bases) assembled on 2009-07-06
> UFO05275.5prime
CAGTCGACATGGAATCACAAGACTACATATTGGCGAATGACGATCTTCAA
GACATTTGCGAAGCCTTCGAGCTCTGTGATCCTGAGAAGACTGGAAGAAT
CAGAGCAGACGATTTGGGAGAAGTGATGCGCACTCTCGGCCAGAATCACA
CCGAGTCGGAAATCTACAGATATTCCGAGGGACTCGAGGGAGACGTCAAC
GGGTACATACAACTCACTGATTTCATCGATTTGATGACCAAAATCTACAG
CGCGATGGGCAGCAGTGACTATTTGAAGGCAGCATATAATGCCTTCGATT
TTGATAAGGACGGTTTGGTAACATATGGCGAGCTACGTCACGTTTTCATC
AATCTTGGCGAAAAAATATCCGACGAAGAGTTCAATGAAGTGTTTCGTCA
GGCTGATGTTGATGGCGATGGCGTTATTAACTTCCGTGATTTTTGTACAG
CCTATAGATCCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAG
GTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCC
TAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACG
CCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTC
ATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACG
CCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTG
CCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGG
CATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGG
GGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAAC
TCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTA
GGGAATAGCCAGCTTTCACGTAACACGCCACATCTGCGAATTATGTGTAG
ACTGCGGAATCGTCGTGTATCCCTCCAGAGCATGAAACGTTTCAGTTGCT
CATGAAACGGTGTACAGGTGAACCTATCCATATCACAGCTACGTCTTCTG
CATCGAATTTCGGATGACATCTCAGGG
UFO05275.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13898-RA | 625 | CG13898-RA | 79..531 | 9..461 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 803521..803973 | 461..9 | 2265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:52:20 has no hits.
UFO05275.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:55 Download gff for
UFO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13898-RA | 70..534 | 1..465 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:43:00 Download gff for
UFO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13898-RA | 70..534 | 1..465 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:23 Download gff for
UFO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13898-RA | 70..534 | 1..465 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:23 Download gff for
UFO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 803521..803979 | 1..461 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:43:00 Download gff for
UFO05275.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 803521..803979 | 1..461 | 99 | | Minus |
