UFO05276.5prime Sequence
1117 bp (1006 high quality bases) assembled on 2009-07-06
> UFO05276.5prime
CAGTCGACATGTCCAGATCGGCAAAGGGCTTTGGTCGTTTAATCAATCCG
GGCGTGGTACTCCATCCGGAACTGCATCAAAAGATGGCCGACTTTGAGGC
CATGACCATCGAGCGATCTGATTTGGATCACGAATTGAGCCGATTGCGCA
AGCAGCAGGACGATACCGAGGATAATTTGGCAGAGGCGCTGGCCGAGGAC
GAGTTCCAGTGCAATTTGAGTGGCCAGCCATTCGTTGCTCCCAACGAGGA
CGAGCTGCAGGAAATTCTGAGGAATCACCTCGGTAGCATTATCAACAAGC
TGGCTGCCACGTACGAGCGCCTTATTTACCTGGATGCGGACATCAGGAAG
CTGAAGGGAGTCATTGAAAAGGCCATCACAGTGGCTAATGAGGAATCGGC
AGCAGCCGCCTCAATGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGG
CCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAAC
TAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAA
AAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTG
AGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAA
TTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCA
TTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCC
AGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAA
AACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGG
TGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAAC
CCTTTAGGGAATAGCCAGGTTTTCACCGTACACGCACATCTTGCGAATAT
ATGTGTAGAACTGCGGAAATCGTCTGTATTCACTCCAGAGCGATGAAACG
TTTCAGTTGCTCATGGAAACGTGTACAGTGAACACTATCCATATCACAGC
TCACGTCTTCATTGCATACGAATCGGATGAGATCATTCATCAGCGCAGAA
TGGATAGACCGTAACTG
UFO05276.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14071-RC | 585 | CG14071-RC | 76..483 | 9..416 | 2040 | 100 | Plus |
| CG14071-RB | 1225 | CG14071-RB | 150..557 | 9..416 | 2040 | 100 | Plus |
| CG14071-RA | 659 | CG14071-RA | 150..557 | 9..416 | 2040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10888371..10888778 | 416..9 | 2040 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:08:11 has no hits.
UFO05276.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:56 Download gff for
UFO05276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14071-RA | 121..545 | 1..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:30 Download gff for
UFO05276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14071-RA | 145..569 | 1..428 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:46 Download gff for
UFO05276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14071-RA | 145..569 | 1..428 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:46 Download gff for
UFO05276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10888371..10888783 | 1..416 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:30 Download gff for
UFO05276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10888371..10888783 | 1..416 | 99 | | Minus |
