UFO05277.5prime Sequence
1123 bp (1009 high quality bases) assembled on 2009-07-06
> UFO05277.5prime
CAGTCGACATGTCATCCGAAGAAGAGGTATACACGGAGGAGGAGACTGAT
CAGGCCATGTCCTTCATTCGTGAGCATGACCTGCCCATGTCGGAGCTGCA
GTATGCACTCAGATATGTCCGCATTCTGCGCGAAAACAAATCACTGAGCG
ATCAGGTTATGGGAATCCGTGAGCCACAGAATCCTGTTGCTGAGGTGGCG
CCACCGTCATTCGACTGGAATGACAAGGAGAATAAAGCCGTGGCCCGGGA
TCCAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAA
GAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCC
AGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAA
TAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAG
AAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAACGTTT
CAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGACACTATCCCATATCA
CCAGCTCACCGTCTTTCATTGCCATACGAAATTCCGGATGAGCATTCATC
AGCGGGCAGATGTGAATAACGCCGGATAAAACTTGTGCTTTTTTTTCTTT
ACGTCTTAAAAGCGTAATATCCAGCTGAACGTCTGGTATAGTACATGGAG
CACTGACTGAAATGCCTCAAATGTTCTTTACGATGCATGGGAATATATCA
CCGGTGAAATCAGGATTTTCCAA
UFO05277.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14113-RA | 513 | CG14113-RA | 84..329 | 9..254 | 1230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13329286..13329515 | 25..254 | 1150 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:04:06 has no hits.
UFO05277.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:19:58 Download gff for
UFO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14113-RA | 1..251 | 9..262 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:01:08 Download gff for
UFO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14113-RA | 76..334 | 1..262 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:14 Download gff for
UFO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14113-RA | 76..334 | 1..262 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:14 Download gff for
UFO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13329288..13329515 | 27..254 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:01:08 Download gff for
UFO05277.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13322388..13322615 | 27..254 | 100 | == | Plus |
