UFO05278.5prime Sequence
1076 bp (989 high quality bases) assembled on 2010-12-10
> UFO05278.5prime
CAGTCGACATGGATAAACCCACAACTAGCGCCGCTGCTGCTGCGGCTCAG
GATTCCAACCTTCTTCCGGACTCCCCACAACACGGACCAACGTTGTCCAG
CGCCTCCAGTTTCGAGGCACTGACGCGACACGACCCCAATCTCAGTCGTT
TGGCCACGAAAATGTTCAACAAAACGGAGGAGTACATCACACACGAACTG
AACGCTCCGCTGGAGGATTACAAGCTGCTGGAGGAGATGAACAAGGCTAC
GATTGCCAAGTACAAGGATATGCGGCAGATTGCCGAGAATCTGAATACTT
CGACCAGTGAATTGAGCCTTAAGTTCCAGCAATTAGCTCCGATGATGCAG
CAAATCGATGAGATTTCCGACACCGTCGACAAATTGGAGGCGGCGGCCTA
TAAACTGGACGCATACAGCATAGCCCTAGAAAATCGCGTCAAGTGCGTGC
TGCAAAGGAAATCCGGAGGCGGTCAAGTGGCACAAGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTAT
AATATTTGCCCATGGTGAAACGGGGGCGAGAGTGTCCATATTGGCCACGT
TTAAATCAAACTGGTGAAACTCACCCAGGATTGGCTGAGACGAAAACATA
TCTCATAACCCTTTAGGAAATAGCAGTTCACGTACACGCCCATCTGCGAA
TATATGTGGTAGAACTGCGAATCGTCTTGTATCACTCGAGATGAAACGTC
AGTTGCTCATGGAAACGGTACAGTAA
UFO05278.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Blos2-RA | 645 | CG14145-RA | 69..545 | 9..485 | 2340 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11061639..11062115 | 9..485 | 2340 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:17:58 has no hits.
UFO05278.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:20 Download gff for
UFO05278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blos2-RA | 61..555 | 1..496 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:25 Download gff for
UFO05278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blos2-RA | 61..555 | 1..496 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:25 Download gff for
UFO05278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Blos2-RA | 61..555 | 1..496 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:25 Download gff for
UFO05278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11061631..11062111 | 1..481 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:25 Download gff for
UFO05278.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11054731..11055211 | 1..481 | 98 | == | Plus |
