UFO05285.5prime Sequence
1048 bp (949 high quality bases) assembled on 2009-07-06
> UFO05285.5prime
CAGTCGACATGGAACCCTCGTTTTCCAATACTAACAAATCGGAACTTCAG
AACCAACTACGAGTAGAGAGAGCTCTGCAAGATAAATATTTAAAAGAATT
TTCTTCAATGGCGGATGAGCTAAATCACTTAATTGATGGCACTACTCCCA
GCCATATTGAGACTTATGAATATTTGGACACTGTCGACACTGAAAGCGGT
CGTTCTCTCGAAGAAGAGAAAAAGTTAACTAACTTTTTCTATAAATTGAA
GAGCGATCTACAGAAATTATATAGAGAAATCGTAGAGAACCCAAAATATT
TAAACGAAATCAGGGATTCAACTATTATAAGGGACAATATAGATTTACTG
GATGAAGTAGACGCTTTTGAAGGTTCGATGAATATGCTTGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGGTGAAAACGGGGGCGAAGAAGTTGTCCATAT
TGGCCACGTTTAAATCAAACTGGTGAAACTCACCCAGGGGATGGGCTGAG
ACGAAAAACATATTTCTCAATAAACCCTTTAAGGGAATAGGCCAGGATTT
CACCGTACACGCCCACATTCTTGCGATATATGTGGTAGAAACTGCCGGAA
TTCGTGTGTATTCACTCCAAGAGGCGATGGAAACGTTTCAGGTTGCTCAT
GGAAACGTGTTAACCAGGGTGACAACTATCCCATTATCCACCAGCTCA
UFO05285.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31909-RC | 628 | CG31909-RC | 162..542 | 9..389 | 1905 | 100 | Plus |
| CG31909-RB | 555 | CG31909-RB | 89..469 | 9..389 | 1905 | 100 | Plus |
| CG43800-RB | 505 | CG43800-RB | 89..469 | 9..389 | 1845 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7257732..7258112 | 9..389 | 1905 | 100 | Plus |
| 2L | 23513712 | 2L | 7232230..7232610 | 389..9 | 1845 | 99 | Minus |
Blast to na_te.dros performed 2014-11-28 23:35:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 6855..7002 | 211..353 | 116 | 55.4 | Plus |
UFO05285.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:52 Download gff for
UFO05285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31909-RC | 162..542 | 9..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:51 Download gff for
UFO05285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31909-RB | 89..469 | 9..389 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:08 Download gff for
UFO05285.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31909-RB | 89..469 | 9..389 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-29 00:07:08 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:07:51 has no hits.
