UFO05288.5prime Sequence
1112 bp (1004 high quality bases) assembled on 2009-07-06
> UFO05288.5prime
CAGTCGACATGGACAGCCCAGTAAAACAGCGCCTAAAACCCAAGAAGCTG
GACAAACATCCAGGAACTCAGAAGGTCGAGTTCAAAAAGGATATCATCGA
TGAGGTAGCGGATCAGTCGGTTGAATACGATTACATGAAGTATCCCAGCA
ATAAAGAGAAGGCAAAACTCCTGAAAGGCGTTAAACCATCGAAAAGTGTC
ACATTCAAGACGGTGGTGGAGCTGGTGACCTATTCGGAAAACTGGAAGAT
GAAGATGAGCGAGAGCAGGCTGCGCTCGGAGGATGAGCAGCTGAAGAGCT
CCCAAAAATATCGCAACTACGCAAGCTTTCTAGACCATTCGTTTGGCGCG
CGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCA
CAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAA
TAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGT
TCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATAT
CAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTA
AGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAAT
CGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGG
TGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAA
CTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAAT
AAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTT
GCGAATATATGTGTAGAAACTGCCCGGAATCGTCGTGTATTCACTCCAGA
GCGATGAAAACGTTTCAGTTTGCTCATGAAAACGGTGTAACAGGTGACAC
TATCCCATATCACCAGCTCACCGTCTTTCATGCATACGAAATCGATGAGC
ATCATCAGGCGGCAGGATGTGATAGCGATAACTGTGCTTTTTTCTTACGT
CTTTAAAGCGTAATTCAGCTGACGGTCTGTTAGTCTGGACACTGACTGAA
TGCCTAGTCTAC
UFO05288.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:30:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15705-RA | 465 | CG15705-RA | 71..384 | 7..320 | 1570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:30:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16281020..16281303 | 7..290 | 1420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 23:30:50 has no hits.
UFO05288.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:16:59 Download gff for
UFO05288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15705-RA | 63..395 | 1..330 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:36 Download gff for
UFO05288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15705-RA | 63..395 | 1..330 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:04:28 Download gff for
UFO05288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15705-RA | 63..395 | 1..330 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:04:28 Download gff for
UFO05288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16281012..16281303 | 1..290 | 98 | -> | Plus |
| 2R | 16281519..16281548 | 291..320 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:36 Download gff for
UFO05288.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12168517..12168808 | 1..290 | 98 | -> | Plus |
| arm_2R | 12169024..12169053 | 291..320 | 100 | == | Plus |
