UFO05290.5prime Sequence
1096 bp (1006 high quality bases) assembled on 2009-07-06
> UFO05290.5prime
CAGTCGACATGAGACAGCAGCTGCTGGACGAGGAGTTCGAGAATCTGCGT
CGCGTAGCGCTGGCCATATGCGAGAATCTCGGGAGACCAAAAGATCGGGA
GATATGTCGAAGCACTCTAGAAGATCTGGCCAAGTTCCGCCAGGGATCGT
CGATTAGGATTAAGGAGAATGTGCATAAGTTCCTGATGTTCTATCTAAAA
GTTCTGAGATGGTCGTACAAGAATCAGCCAACGGATCTATATCGCAAATG
GTATGGACAAAACTTTGGCAAGGACCCAAAGTCTGCCCCATCGGCCGGCA
ATTCCGAGGATGAACAGCGTGTTTGGTTGGAGGAGGGCAAGTCCTTTTAC
GCCATGAAAACATTTGAAGATGGCTCCACAGTTGTTTACTCAGCGGTGGT
TAAGGATGCGAGAGCTGGTTGGTCGGAAAATGGTCTGAAAACTCTGATGG
AAACGCAAGTGGGCTGCGCTTTGAATCGAAATGAAAATGCAAGCTTTCTA
GACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCA
TAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAG
TGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTG
AACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAG
TCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAG
TACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAAC
GGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCG
TATAATATTTGCCCATGGTGAAAACGGGGGCGAGAGTTGTCCATATTGGC
CACGTTTAAATCAAACTGGTGAACTCACCCAGGGATTGCTGAGACGAAAA
CATATTTCTCATAACCCTTTAGAATAGCAGTTTCACGTACACGCCACATC
TTGGCGAATTATTTGTGTAGAACTGCGAAATCGTCTGCATCATCGACGAT
GAAACGTTTCAGTTTGCTATGAACGGTTACAGGGAATCTATCATCC
UFO05290.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:51:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17217-RA | 626 | CG17217-RA | 108..587 | 9..488 | 2400 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12170657..12170899 | 9..251 | 1215 | 100 | Plus |
| 2L | 23513712 | 2L | 12170956..12171193 | 251..488 | 1190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:51:53 has no hits.
UFO05290.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:01 Download gff for
UFO05290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17217-RA | 1..483 | 9..491 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:45 Download gff for
UFO05290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17217-RA | 108..593 | 9..496 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:12 Download gff for
UFO05290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17217-RA | 108..593 | 9..496 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:12 Download gff for
UFO05290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12170657..12170899 | 9..251 | 100 | -> | Plus |
| 2L | 12170957..12171193 | 252..488 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:45 Download gff for
UFO05290.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12170657..12170899 | 9..251 | 100 | -> | Plus |
| arm_2L | 12170957..12171193 | 252..488 | 100 | == | Plus |
