UFO05296.5prime Sequence
1089 bp (962 high quality bases) assembled on 2010-12-10
> UFO05296.5prime
CAGTCGACATGCAGGAAGCAGAGACAGATCCAAAGCGAACTAAAAGTTAC
GTGGAAGAAGTATTTCGCAAAGTGCAGGAGAAACCCGGCGTGGAGGACAT
ATTGATCATGAATCACTCGGGTGTGCCGGTGAAAACCTCGATGGATCGTC
AGGAGGGCTTGCAGTACGCCTGTCTATATGACAATTTGCGGGAGAAGTGC
CAGGCGTTCCTCTCCAAAATGGAGCCAGCCCAAAATTTGACTCTACTGAG
AGTTCGTACCAAGTATCACGAGGTGCTCATTACACCAGATGCCAAGATCA
CCGTTTTGGTGGTTCAGAATGCCAAAGATACTTTTCTTAACATAAAGGGT
GCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCA
TAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCT
GGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAA
CCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATC
TATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGC
CACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAA
GCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCT
TGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAG
TTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGG
ATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGG
CCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAAC
TGCCGGAATCGTCGTGTATTCACTCAGAGCGATGAAACGTTTCAGTTGCT
CATGCAACGTGTACAGGTGACACTATCCATATCACCAGCTCACCGTCTTT
CATGCCAATACGAAATCTGATGACCATCATCAGGCGGCAGATGTGATCGG
CGGACTAAGAGCGTGGCTACTTCTTACGGTCTTTGAAGG
UFO05296.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10822-RA | 554 | CG10822-RA | 111..452 | 9..350 | 1710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19951528..19951848 | 30..350 | 1605 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 17:18:04 has no hits.
UFO05296.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2010-12-10 11:25:21 Download gff for
UFO05296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10822-RA | 15..371 | 1..359 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:26:29 Download gff for
UFO05296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10822-RA | 103..459 | 1..359 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:55:29 Download gff for
UFO05296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10822-RA | 103..459 | 1..359 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:55:29 Download gff for
UFO05296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19951528..19951848 | 30..350 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:26:29 Download gff for
UFO05296.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15839033..15839353 | 30..350 | 100 | == | Plus |
