UFO05301.5prime Sequence
995 bp (865 high quality bases) assembled on 2010-04-05
> UFO05301.5prime
CAGTCGACATGTACAATTTGGGGGGGTTCTTCGCTCTGCTCGCCGTCGTG
GCTGCCCGTCCGGGTTATTTGGAGTCTGGTCCACTGCTCCACAGCTATGC
CGCTCCTGCCATCATCCATGAACCGGCTCTGGCCAAGGTGGGCGCCATCA
TCAAGACCGTGCCCAGTGCCGTCTCCCACCAGAGCATCAGCCAGGTGCAC
AGCTCGGCCCACATCATCCAACCGATTGTGGCTCCGGTGGTGAAGACCTA
TGCCGCTCCCATCATCAAGACTTATGCGGCTCCTGCCCTCCACACGACCC
TCCTCTCGTCTCCGTGGGCCGGACATGGTTGGGCTGGCCATGGCTGGGCT
CCGTCCTGGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGT
AAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTA
GGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCC
CGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCAT
TACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCC
CCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCC
GACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCA
TCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGG
GCGAAGGAGTTGTCCATATTGGCCACGTTTAATCAAAACTGGTGAAACTC
ACCCAGGGATTGGCTGAAACAAAAACATATTCTTCAATAAACCCTTTAGG
GAAATAAGGCAGGTTTTCACCGTAACACGCCACATCTTGCGGAATTTTTG
TGTAGAACCTGCGAAATCGTCTGGTATCCACTCCAAGAGCGATGAAACGT
TTTCCGTTGCTCATTGAAAACGGTGTACAAGGTGAACAACTATTC
UFO05301.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:35:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13042-RA | 571 | CG13042-RA | 66..416 | 9..359 | 1710 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:35:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16308001..16308334 | 359..26 | 1670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:35:38 has no hits.
UFO05301.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:03 Download gff for
UFO05301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13042-RA | 1..354 | 9..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:07:58 Download gff for
UFO05301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13042-RA | 66..419 | 9..363 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:07:15 Download gff for
UFO05301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13042-RA | 66..419 | 9..363 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:07:15 Download gff for
UFO05301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16308001..16308333 | 27..359 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:07:58 Download gff for
UFO05301.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16301101..16301433 | 27..359 | 100 | <- | Minus |
