UFO05303.5prime Sequence
1156 bp (1027 high quality bases) assembled on 2010-04-05
> UFO05303.5prime
CAGTCGACATGTCCGCGGAAATCGAGGATTTGCTGAAACGCTATCAAAAC
TACCCCAATGTTTCTGGCATAATTATTTTGGACCCGTTCGCTATACCAAT
CAAGACCACCATGGAGTACACCTTGACCGTGCATTACGCGGCCTTGATCA
GCACCTTAACTTATAAGGCGGCCAAAATGATTACCAATTTGGATGCCAGC
AATGAGCTGGTGACAATACGTCTGCGCACCAAGGTTCACGAGGTGATTGT
GCTGCCCTCCGAGAACTACATCATTATTGTAGTGCAAAATCCAGGCACCG
CAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCAT
AATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTG
GTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAAC
CGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCT
ATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCC
ACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAG
CCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTT
GTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGT
TGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGA
TTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAATAGGCC
AGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTG
CCGGAAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGC
TCATGGAAAACGGTGTAACAGGTGAACACTATCCCATATCACCAGCTCAC
CGTCTTTCATTGCATACGAAATTCGGATGAGCATTCATCAGCCGGGCAAG
AATGGGAATAAGGCGGATAAACTTGTGCTTTTTTTTCTTACGGCCTTAAA
AGGCGTAATATCCAGCTGACGGCTGGTATTAGTTACATTGAGCAACTGAC
TGAAATGCCTCAATTTCTTACAATGCCATGGATATCACCGTGTATCCATG
GATTTT
UFO05303.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10834-RA | 443 | CG10834-RA | 61..351 | 9..299 | 1455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 22106954..22107244 | 299..9 | 1455 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 19:58:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 230..290 | 864..923 | 113 | 67.2 | Plus |
UFO05303.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:04 Download gff for
UFO05303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10834-RA | 36..335 | 9..308 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:54 Download gff for
UFO05303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10834-RA | 36..335 | 9..308 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:28 Download gff for
UFO05303.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10834-RA | 61..360 | 9..308 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:47:28 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:23:54 has no hits.
