UFO05305.5prime Sequence
1126 bp (1008 high quality bases) assembled on 2010-04-05
> UFO05305.5prime
CAGTCGACATGGAGTATCAGCACTATTTGCAGAATGAGCTGACCATTTTC
CACTACCACCTACTCTTCGACTATGGAGCACCGATCCAGGTGGCCACTTG
CATTGCCTTCGGCGTCGTCTGCGGCTGGATAATGAGCCTGATCACATTCG
TTGTCTACAAGGCAGCAATTGGCCTGGGCGCCAAAGCCACGGCATGTGAC
AACGATGATAAGTACGATGATCTCGACCTGGACATGCATGGGGAGTATGG
GTATGACCGGATGTTGTCCCAGTGCCAGGACCTTAGTGATTGGCTTGTGA
GGACACAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATT
ACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCC
CGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCG
ACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCAT
CAGCACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGG
CGAAGAAGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTC
ACCCAGGGATTGGCTGAGACGAAAAACATATTCTCAATAAACCCTTTAGG
GAAATAGGCCAGGTTTTCACCGTAACACGCCACATCTTGCGAATATATGT
GTAGAAACTGCCGGAAATCGTCGTGGTATTCACTCCAGAGCGATGAAAAC
GTTTCAGTTTGCTCATGGAAAACGGTGTAACAAGGGTGAACACTATCCCA
TATCACCAGCTCACCGTCTTTCATTGCATACGAAATCCGATGAAGCATTC
ATCAGGCGGCAAGATGGGAATAAGGCGGATAAACCTTGGTGCTTATTTTT
CTTACGTCTTAAAGCCGTATATATACCAGCTGAACCGCTTGTTATAGGTA
CATTGAACACTGGACTGAATGCCTCA
UFO05305.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13984-RA | 657 | CG13984-RA | 49..348 | 9..308 | 1500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6308867..6309166 | 9..308 | 1500 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 23:17:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 232..299 | 877..944 | 123 | 68.1 | Plus |
UFO05305.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:05 Download gff for
UFO05305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 1..303 | 9..309 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:17:18 Download gff for
UFO05305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 49..354 | 9..316 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:06:06 Download gff for
UFO05305.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13984-RA | 49..354 | 9..316 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-29 00:06:06 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 01:17:18 has no hits.
