UFO05312.5prime Sequence
1067 bp (884 high quality bases) assembled on 2010-04-05
> UFO05312.5prime
CAGTCGACATGTTCACCGGTCGGCTTCTCATCGGGTCCCCGATATTCGAG
GCTAAGATGCGGCTACAGCAGAGGCGACGAATGTCAGAGCACAGGCTTCC
GTACCATCGCAGACCTGCGCCCGTAAAGCTCCAGGACCGTAAGAGTTCAT
GGACCGATCTAAAAAGGCCGCCCTTCCTGCTGGTCAAGAGCTTCCTCAAC
TTGCGCCACATGGACGCCGACTACGGGAAGGACATGACACGAGTTACGGA
CGAGCTAAGTTTCCAGCCCCACCGCACCCTCTTAATCAATACCGTGCGAG
GGCCGCATCGTCAGTTTTCGGACACGGAACCAATTGCGGACATGATGGAT
AAAAGTCCGGTAGCTTTGGACTCGGATTCGAAGCCGGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC
CAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTA
CTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGG
CATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTA
TAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGC
CACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGA
AAAACATATTCTCATAAACCCTTTAGGGAAATAGGCCAGTTTTCACCGTA
ACACGCCACATCTTGCGAATAATATGTGTAAGAAACTGCGGAAATCGTCG
TGGTATTCCCTCCAGGAGCGATGAAAACGTTCAGTTTGCTCTTGGAAACG
GTGTAACAGGGTGAAACACATATCCATATCCACCAGCTCACGTCTTTTCT
TTGGCCATACGAATTTC
UFO05312.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14759-RB | 557 | CG14759-RB | 110..487 | 9..386 | 1890 | 100 | Plus |
| CG14759-RA | 643 | CG14759-RA | 196..573 | 9..386 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8260036..8260413 | 9..386 | 1890 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:47 has no hits.
UFO05312.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:02 Download gff for
UFO05312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14759-RA | 1..381 | 9..389 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:01 Download gff for
UFO05312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14759-RA | 192..573 | 1..386 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:58 Download gff for
UFO05312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14759-RA | 192..573 | 1..386 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:15:58 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:40:01 has no hits.
