UFO05314.5prime Sequence
993 bp (855 high quality bases) assembled on 2010-04-05
> UFO05314.5prime
CAGTCGACATGAGCGTGATCAAGTCCATATTTCTGCTCAGTATTTTGGCT
GTCTGCCTCATTCCCCGGGAGACGGAGGCCCAGGCCACTATAAGTGAAAG
CTGGGGAAGGCTGGGCAAGTGTACTCAGGTGGCCATCGAAACACTGACCA
GCCTGGCCGATAAAATCGTCCCGACCGTATATGAGTTGAAACAATGCTCC
GGATACGTAACTTTGGAACCGGCAAACGGCAAAGACAGAAAGATTACCTG
GTACCTAAAGGTATCCTATGAATTCTTCAAGAAACTTGTCTTTGACGAAC
CCAAATGTCTGCACGGTCTACTGAACAAGTTGGCTGCCACAATCAAACCA
TTTGCCGAGCAGATATCGGGATTAGGTTGCTTGGACGAAGAAGATTATAT
CATTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTG
GTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGA
TCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCG
GCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTG
GATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCC
CTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGC
ACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAACGGGGCGAGAG
TTGTCATATTGCCACGTTAATCAAACTGTGAACTCACCAGGGATGCTGAA
CGAAAAAATATCTCATAACCCTTTAGGGAATAGCAGGTTTCACCGTACCC
GCCACATCTGCAATATATGTGTAGAACTGCCGAATCTGCCTGATCACTCC
GAGCGATGAAACGTTCAGTTGCTCATGAAACGGTACAGGTGAC
UFO05314.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp53C14b-RB | 590 | CG15616-RB | 40..435 | 9..404 | 1980 | 100 | Plus |
| Acp53C14b-RA | 499 | CG15616-RA | 40..435 | 9..404 | 1980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16748970..16749323 | 404..51 | 1770 | 100 | Minus |
| 2R | 25286936 | 2R | 16749378..16749421 | 52..9 | 220 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:08:49 has no hits.
UFO05314.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:13 Download gff for
UFO05314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 20..425 | 1..408 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:56 Download gff for
UFO05314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 20..425 | 1..408 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:41:06 Download gff for
UFO05314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp53C14b-RA | 33..438 | 1..408 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:41:06 Download gff for
UFO05314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16748970..16749323 | 51..404 | 100 | <- | Minus |
| 2R | 16749380..16749428 | 1..50 | 94 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:56 Download gff for
UFO05314.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12636475..12636828 | 51..404 | 100 | <- | Minus |
| arm_2R | 12636885..12636933 | 1..50 | 94 | | Minus |
