UFO05318.5prime Sequence
982 bp (780 high quality bases) assembled on 2010-04-05
> UFO05318.5prime
CAGTCGACATGATCAAGACCGCGCTAATCATTTCCCTGTTCCTGGTGGCC
GCCATCCGGGCTGCAGACGAATCTCAGGCCGAGACCACCAAGTACCGCAA
CGAGATCAAGCCGGATGGCTCATACAGCTGGGAATACGGAACGTCCAACG
GCATCGATGCCCAGGAGAGTGGAGTGGGTGGAGTCCAAGCTGCCGGATCC
GTGAGCTACGCTGCTCCCGATGGAACACCCATCCAGCTGGAGTACACTGC
CGATGAGAACGGATATCGTCCTACTGGTGCTCATCTGCCCACGCCGCCTC
CCATTCCTGATTACATCCTCAAGGCTTTGGCCTACATCGAAGCGCATCCA
TTCCAGAGGATTCAGCTGAAGAAGGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCCA
TGGTGAAACGGGGCGAAGAGTTGTCATATTGCCACGTTAAATCAAACTGG
TGAACTCACCCAGGATTGCTGAACGAAAACATATCTCAATAAACCCTTAG
GAATAGCCAGTTCACGTACCCGCCAATCTTGCAATTTATTGTGTAAGAAC
TGCCGAATCGTCTGTATTCACCCCAGAGCGATGAAACGTTTCAGTTGCTC
ATGAACGGTACAGGTGAACCTATCATACACAG
UFO05318.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Cpr67Fb-RA | 457 | CG18348-RA | 19..384 | 9..374 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 10894267..10894620 | 21..374 | 1770 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| BS | 5142 | BS BS 5142bp | 2464..2510 | 777..731 | 109 | 70.2 | Minus |
UFO05318.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:16 Download gff for
UFO05318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 1..369 | 9..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:23:59 Download gff for
UFO05318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 12..384 | 1..374 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:30 Download gff for
UFO05318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Cpr67Fb-RA | 12..384 | 1..374 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:30 Download gff for
UFO05318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 10894267..10894620 | 21..374 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:23:59 Download gff for
UFO05318.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 10887367..10887720 | 21..374 | 100 | == | Plus |
