UFO05319.5prime Sequence
1129 bp (1005 high quality bases) assembled on 2010-04-05
> UFO05319.5prime
CAGTCGACATGTCTGACAAGGATAAGAAAGATAAACCGGAACAGTTGGAT
GATGATTCCAGTGACGACGATGCCAACCAGAGAGCAGTTCGAGATCAGTA
TTCCGATCCTACCATCAGTGCATCCCCCTCGATTCTGCGACACCCCAACG
CTCCCCGTCCTGATATTTCAAGTGCCCCCTCGGTTGTCATTGCGTTGCCA
AGTAGCGAGACCCTCGTCGTGACCGAGGAAACTCCGGAGGAGCGACTCCG
GCGAAGAATGAGGTTTCTCGAGTTGCGGCGTGAGCACTACAACTACGTCA
GCCATAGCGAGCAATGCAACATGGCGGATACGGAGGATGAAGATCACACG
GAGAATCACCCAAAGTGTGAAGCCAATTGCAAGCCGGAAGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATC
ATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTA
GTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCT
GAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGA
GTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCA
GTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAA
CGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGC
GTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATT
GGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGA
CGAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCAC
CGTAACACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCG
TCGTTGTATTCACTCCAGAGCGATGAAAACGTTTCAGCTTTGCTCATGGA
AAACGGTGTAACAGGGTGAACCACTATTCCCATTATCACCAGCTCCACCG
TCTTTCATTGCAACGAAATTCCGGAATGAACATTCTCAGCGGGCAGAATG
ATAAGGCGCGATAAACCTTGTGTCTTATT
UFO05319.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:55:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18666-RA | 514 | CG18666-RA | 58..438 | 9..389 | 1905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:55:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 11034852..11035232 | 9..389 | 1905 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 21:55:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| transib1 | 2167 | transib1 TRANSIB1 2167bp | 229..289 | 954..1015 | 136 | 71 | Plus |
UFO05319.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:17 Download gff for
UFO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 1..384 | 9..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:44:36 Download gff for
UFO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 58..446 | 9..397 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:43 Download gff for
UFO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18666-RA | 58..446 | 9..397 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:43 Download gff for
UFO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 11034852..11035237 | 9..394 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:44:36 Download gff for
UFO05319.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 11034852..11035237 | 9..394 | 99 | -> | Plus |
