UFO05326.5prime Sequence
1099 bp (939 high quality bases) assembled on 2010-04-05
> UFO05326.5prime
CAGTCGACATGGGTATTACTCTGTTCCGATTGGCCAGTTTTACTCCAAAA
CTGAAGGAGCTGCGAATCATTCTGGATCCCAAAGGAGACACTTCCAAGGG
AGTCAGGGAATACGTGGAAAGGTTCTATCCAAACCTGAAGAAGAGCAATC
CCGACCTGCCGATCCTCGTGCGCGAGTGCTCTGGCGTCCAGCCCCGCCTC
TACGCCCGCTATGGCAACGGCAAGGAAGTGTCCCTCTCCCTGGCCAACCA
CGCTGCTCCTGACATACACAAAAACCTGGAAGCGGTTGGCAAAGCAAGCT
TTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCAT
AATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATG
ACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCG
TTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAAC
AGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCAT
CGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCA
CAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCC
TTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCA
TATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCT
GAGACGAAAAACATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTT
TTCACCGTAACACGCCACATCTTGCGATATATGTGTAGAAACTGCCGGAA
ATCGTCGTGTATTCACTCCAAAGCGATGAAAACGTTTCAGTTTGCTCATG
GAAAACGTGTAACAAGGGTGAAAACTATCCCATATCACACTTCACCGTCT
TTCTTTGCCATACGAAATTCCGGATGAGCATCCTCAGCGGGCAGAAGGAA
ATAAAGGCCGGATAAACTTGGCTTATTTTTCTTCAGGCCTTAAAAAAGGC
GATATCAGCTGAACGCCTGGTTAGGTACTTAGGAACTGACGATGCCTCA
UFO05326.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15434-RA | 460 | CG15434-RA | 104..388 | 9..293 | 1425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4454885..4454995 | 104..214 | 555 | 100 | Plus |
| 2L | 23513712 | 2L | 4454729..4454827 | 9..107 | 495 | 100 | Plus |
| 2L | 23513712 | 2L | 4455055..4455135 | 213..293 | 405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:37:52 has no hits.
UFO05326.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:23 Download gff for
UFO05326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15434-RA | 65..357 | 9..301 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:22 Download gff for
UFO05326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15434-RA | 104..396 | 9..301 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:27 Download gff for
UFO05326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15434-RA | 104..396 | 9..301 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:27 Download gff for
UFO05326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4454729..4454826 | 9..106 | 100 | -> | Plus |
| 2L | 4454888..4454994 | 107..213 | 100 | -> | Plus |
| 2L | 4455056..4455135 | 214..293 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:22 Download gff for
UFO05326.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4454729..4454826 | 9..106 | 100 | -> | Plus |
| arm_2L | 4454888..4454994 | 107..213 | 100 | -> | Plus |
| arm_2L | 4455056..4455135 | 214..293 | 100 | == | Plus |
