UFO05330.5prime Sequence
1143 bp (1009 high quality bases) assembled on 2010-04-05
> UFO05330.5prime
CAGTCGACATGTTCCGCCGCACTAATGCCGATCCGGTCATACGGCAATTT
ATTCTGCGCACTGCAGTCCTCAATTATCTTGGCAAGAGTCTGCGAGAGCA
GTATAATGAATATTGCCTTTTGAGAACCCAGCACGAAAATATTAGGCTGA
AGACTGCGAGTGATCAAGAGCTTGAGGACCTGCCGACTCTTTCCGAGCTA
TTTGAGATGCAACAGTTGAAGACGGCTGCCACCCATCGTCTGCTGATGCG
GGAGTACCAAGAATTGCTTGCCTACATGATGGACAAGAGTGATTTGTGGG
ACAGTCAGGAGTACTTCAAGGCCAAGTCTGCGCTTGGGGCGGCCATCCAC
AATCTACGGGTTTGTGCACCCACCAAACCAATGGACGCAAGCTTTCTAGA
CCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATA
ATCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTG
CTTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAA
CAAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTC
CAAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTA
CTGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGG
CATGATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTA
TAATATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGC
CACGTTTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGA
AAACATATTCTCAATAAACCCTTTAGGGAAATAGGCAGGTTTTCACCGTA
CACGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTG
TATTCCCTCCAGAGCGATGAAAACGTTTCAGTTGCCTCATGGAAAACGGT
GTAACAAGGGTGACCCTATCCCATATCACCAGCTCACCGTCTTTCATGCA
ACAAATTCCGATGACCATCATCAGCGGGGCAGAATGTGATAAGGCGGATA
AACCTGTGCTTAATTTTCTTACGCCTTAAGGCGCGTATATCCC
UFO05330.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14684-RA | 487 | CG14684-RA | 29..407 | 8..386 | 1895 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10707002..10707380 | 8..386 | 1895 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:37:59 has no hits.
UFO05330.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:26 Download gff for
UFO05330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14684-RA | 29..410 | 8..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:25 Download gff for
UFO05330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14684-RA | 29..410 | 8..390 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:30 Download gff for
UFO05330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14684-RA | 29..410 | 8..390 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:30 Download gff for
UFO05330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10707002..10707380 | 8..386 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:25 Download gff for
UFO05330.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6532724..6533102 | 8..386 | 100 | == | Plus |
