UFO05332.5prime Sequence
1107 bp (958 high quality bases) assembled on 2010-04-05
> UFO05332.5prime
CAGTCGACATGTTTCTCGCCAAGATTCTAATCCTGTGCACCGCCTGCGTG
TTGGTCAGTGCCACGCCGTTTGGACTCGGTGCACCAAAAGTCCTCGAAGG
CGAGGATCTGGCCAGTGCCCAGCAAACGCTTGAGGCATCCTTGACCAAAT
TGGCTGCTGGCGAAGGACCCCACTATCGCCTCTCCAAAATTCTTTCGGCA
ACGTCCCAGGTGGTCTCTGGCTTTAAGAATGATTACTCTGTGGAGCTGAT
CGATAATCAGGGTGCTACCAAGGTGTGCCAAGTGGACATCTGGTCGCAAA
GCTGGCTTCCCAATGGTATCCAGGTGACCTTCAGGTGCCCAAATGAACCA
GAACTGGTCAGGAAACACGATGCTGCAAGCTTTCTAGACCATTCGTTTGG
CGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATA
ATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCA
CCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATG
GAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCG
ATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTC
ATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGATGAACCT
GAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATATTTGCCC
ATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGTTTAAATC
AAAACTGGTGAAACTCACCCAGGGATTGCTGAGACGAAAACATATTCTCA
TAAACCCTTTAGGAAATAGCCAGGTTTCACCGTACACGCCACATCTTGCG
AATATATGTGTAGAACTGCGGAAATCGTCTTGTATTCACTCCAGAGGATG
AAACGTTTCAGTTGCTCATGGAAACGGTGTAACAGGGTGAACACTATCCA
TATCAAAGCTCACCGTCTTTCATTGCCTACAAATTCCGAGAGAATTCTTC
AGGGGCAGAAATGTGATAAGGCCGATAACTTGGCTTATTTCTACGCCTTA
AAGGCCT
UFO05332.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15369-RB | 542 | CG15369-RB | 55..420 | 9..374 | 1830 | 100 | Plus |
| CG15369-RA | 444 | CG15369-RA | 55..420 | 9..374 | 1830 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9217148..9217344 | 178..374 | 985 | 100 | Plus |
| X | 23542271 | X | 9216926..9217095 | 9..178 | 850 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:24:48 has no hits.
UFO05332.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:28 Download gff for
UFO05332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15369-RA | 34..402 | 9..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:46 Download gff for
UFO05332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15369-RA | 55..423 | 9..378 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:25 Download gff for
UFO05332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15369-RA | 55..423 | 9..378 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:25 Download gff for
UFO05332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9216926..9217095 | 9..178 | 100 | -> | Plus |
| X | 9217149..9217344 | 179..374 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:46 Download gff for
UFO05332.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9110959..9111128 | 9..178 | 100 | -> | Plus |
| arm_X | 9111182..9111377 | 179..374 | 100 | == | Plus |
