UFO05335.5prime Sequence
1084 bp (941 high quality bases) assembled on 2010-04-05
> UFO05335.5prime
CAGTCGACATGGAAGAACTTCAAAAAGTTGGTGTGTTTATAGATGAAATT
TACACGGTGCGAGTTGAGCATCCAAACCTTTCCAGTAGCAAAATAATGTT
TAAACAAGAATGCTTCAACTACATTAAAGCATTCACTATTTTTAAAAAGT
TTGTGTTTAATTATTGTAATATTTCTGAAACGTTTGCCAAAGATGTCGAT
AAGGAAAAACTACGCGCTATTGGTACTCAAAATCAATTAAAAACGGCATT
TATTCAGCGCCAGAACAAGCAGCAAGTCTATCAATATGAGATATTTGAGC
AAACAGTAGAACTTGAACGCTTAAAAGGCGAATTGCAGTTTTTACAGCGA
ATTGAAACGGAGCAACATGAAATAATAAACAATTTTTTTGTCAATCAATA
TGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTC
ATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATCC
TGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGCA
ACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGAT
CTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCTG
CCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGGA
AGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCACC
TTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGAA
GTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAGG
GATTGGCTGAACGAAAAACATATCTCATAAACCCTTTAGGAAATAGGCCA
GGTTTCACCGTAACACGCACATCTGCGAATTATGTGTAGAAAATTGCGAA
ATCGTCGTGTAATCCCTCCAGAAGCGATGAAAACGTTTCAGTTGCTCATG
GAAACCGTGTAACAAGGTGAACCCATATCCATATCACCAGCTCACCGCCT
TTCCATGCATACGAAATCGGAGTAGAACTCCTCA
UFO05335.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30441-RB | 406 | CG30441-RB | 7..399 | 9..401 | 1965 | 100 | Plus |
| CG10395-RE | 1438 | CG10395-RE | 1190..1438 | 401..153 | 1245 | 100 | Minus |
| CG10395-RD | 1175 | CG10395-RD | 927..1175 | 401..153 | 1245 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 5351724..5352116 | 401..9 | 1965 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:24:43 has no hits.
UFO05335.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:21 Download gff for
UFO05335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30441-RB | 1..406 | 2..409 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:43 Download gff for
UFO05335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30441-RB | 1..406 | 2..409 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:24 Download gff for
UFO05335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30441-RB | 1..406 | 2..409 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:24 Download gff for
UFO05335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 5351724..5352123 | 1..401 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:43 Download gff for
UFO05335.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 1239229..1239628 | 1..401 | 99 | | Minus |
