UFO05340.5prime Sequence
1109 bp (1000 high quality bases) assembled on 2010-04-05
> UFO05340.5prime
CAGTCGACATGAAATACAGCCCCACCATGCGTGCTCCTTTAAGAATTCCG
CTTTTATGGCGCCCAACGTTTTGGCGCTTGAAGATCGCTTATGGTTACTC
AAAGGATGTCAATACCCTCAAGCGTTTGGGCGCCAGTCCGCGAAATGTAC
GCGATCACCCCGAAGGATGTACGCCCCAAACTTTGAACACAACTGCCTTC
ACTACTCCCGATTTCATACACCCATCCACCTATCGGATTGTGGATAAAAA
GGAGCAACTTGGACCCAAGGCAGGAAAAAAGCAAACGTACAAGAATCCCG
AGTACTACAGCTATTATCGCTACTCGTACTACGAGCTGAAGACAATCGTG
GATACCATTAAAAAGAAGCAATCATCTAAGAAGGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAA
ATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAA
GCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTG
TTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCAT
GATGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAA
TATTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCAC
GTTTAAATCAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAC
ATATTCTCAATAAACCCTTTAGGGAAATAGGCAGGTTTCACCGTACACGC
ACATCTTGCGAATATATGTGTAGAACTGCCGGAAATCGTCTGGTATTCAC
TCCAGAGCGATGAAACGTTTCAGTTGCTCATGGAAACGGGTACAAGGGTG
ACCCTATCCCATATCACAGCTCACGTCTTCATTGCCATACAATCGGATGG
CATCTCAGGGGGCGAAATGGATAAGGCGGATAACTTTGCTTATTTTCTTA
CGCTTTAAG
UFO05340.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12464-RA | 506 | CG12464-RA | 54..428 | 9..383 | 1875 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13608751..13609125 | 383..9 | 1875 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:52:27 has no hits.
UFO05340.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:38 Download gff for
UFO05340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12464-RA | 54..431 | 9..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:16:57 Download gff for
UFO05340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12464-RA | 54..431 | 9..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:30 Download gff for
UFO05340.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12464-RA | 54..431 | 9..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:41:30 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:16:57 has no hits.
