UFO05342.5prime Sequence
1090 bp (971 high quality bases) assembled on 2010-04-05
> UFO05342.5prime
CAGTCGACATGAACATGAGGGGAATGGCCAAGCGTTCTATTTGGCTCCAA
TGTCTTCGGGAAAATGCCACCAATATGCGCCTGGAGCACGAGGATCTGGG
ACGTCGCATTGCTGTTTCTTTGGCCAGTTCCCAGAAAGCTCTAGTTGATA
TCGAAAACTTGAATCAAGAGCTGTTAAAAATGAAGGACACAATCCATAAT
GCCATTTCCAATGTTATGGGCTACGAAAAGAAGTGTTGTGAATTGCTCCT
GGAAATTTTGATTAAAATAGTTGAGAACAACGACCTGGATGCCGAACTAA
ATCCCAAAATGATCTCCAAGGCGTTTCTCGACTTGGATCCGAGTTCCGAC
GAGACAGAAGTTCTGAATGACCGTAGTCTTGCAGCGTCTGATTTTAATCA
GCAATATCCAAAAGATGTGCCGGATTCTATTGATATAAACATAACAGAAG
ACCAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGT
GGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAG
ATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGC
GGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACT
GGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACA
TGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAG
CACCTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAACGGGGGCGAA
GAGTTGTCCATATTGGCCACGTTTAAATCAAACTGGTGAACTCCCCCAGG
GATTGGCTGAGACGAAAAACATATCTCATAACCCTTTAGGAAATAGCCAG
TTTTCACCGTACACGCCCCATCTGCGAATATATGTGTAGAACTGCCGGAA
ATCGTCTGCATTCCCTCGACGATGAAAACGTTTCAGTTGCTCATGGAACG
GGTAAAGGTGAAACATCCCATATCAACACTCACGCTCATG
UFO05342.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13476-RB | 694 | CG13476-RB | 81..527 | 9..455 | 2220 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14705544..14705990 | 9..455 | 2220 | 99.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:03:07 has no hits.
UFO05342.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:40 Download gff for
UFO05342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13476-RB | 55..517 | 1..464 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:31 Download gff for
UFO05342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13476-RB | 73..535 | 1..464 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:47 Download gff for
UFO05342.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13476-RB | 73..535 | 1..464 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:36:47 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 23:00:31 has no hits.
