UFO05344.5prime Sequence
1071 bp (963 high quality bases) assembled on 2010-04-05
> UFO05344.5prime
CAGTCGACATGTCGCCGTTGCTTCCACTGGCATCGCTAATCATCTTGGCC
AATTTGGTGGCATCTCGACCCTATTCCTATGGTCCACGGGCAGAAGCGCC
TCCCACGAGATTGGCCAACCGGATTGTGGTGCAGTCACCCTCGCTGGACA
ACTTGTATATGGACTACGTGGTCACATCGAAGCCGCTGAATCTGCGCAAG
TACAACAAGAACGGCAGTAAGACGAAAAAAACGAAAAAGGATTCGAAAAT
ATATTACATACCCGTACCCCCACTGCCCTTCCGCCACATACCTGGCATCG
GCTTGGATTATCAGCCGATGAAAATCAATCCCATCCTTCACGAGTCGGAG
AGCACAACGAGAAAGACCACAACGGTTCGCCCACCGACGACGACGACATC
TAGCCCCAATCTGGATCATCGGAATCCGAGCAAAGTACTTCGAGTGCAAC
ACCTCAAGGATTACTACTTCAATGGGCGCCCACATCGACTGCAGGTTGCC
CATGCTGATAAAAAGTCCGGTCTGACGGCCCTTAACCTGAAGTCCAACTT
TTATTATAACAAAAACATTATTTATGCAAGCTTTCTAGACCATTCGTTTG
GCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCAT
AATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTC
ACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGAT
GGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTC
GATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATT
CATTAAGCATTCTGCCGACATGAAGCCATCACAAACGCATGATGATCTGA
TCGCAGCGCATCAGCACTTGTCGCTTGCGTATATATTTGCCATGTGAAAC
GGGGGCGAAAGTTGTCAATGCCACGTAAATCAAACTGTGAACTCACCAGA
ATGGCTGAAACGAAAAACTATTTCCATAATCTTTAAGAATGCCAGGTTAC
ACGTAACGCCATCTGCAATAT
UFO05344.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:44:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13856-RA | 943 | CG13856-RA | 331..897 | 9..575 | 2835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:44:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22404447..22405013 | 9..575 | 2835 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:44:18 has no hits.
UFO05344.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:43 Download gff for
UFO05344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13856-RA | 331..897 | 9..575 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:52:45 Download gff for
UFO05344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13856-RA | 331..897 | 9..575 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:16:34 Download gff for
UFO05344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13856-RA | 331..897 | 9..575 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:16:34 Download gff for
UFO05344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22404443..22405013 | 1..575 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:52:45 Download gff for
UFO05344.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18230165..18230735 | 1..575 | 99 | == | Plus |
