UFO05345.5prime Sequence
1038 bp (924 high quality bases) assembled on 2010-04-05
> UFO05345.5prime
CAGTCGACATGCACAAACGAAGAACCGCCAAATCGATTAATAAGCCACCG
CCAATCCAGGGAGCAATCAAGAAGCCCACGCCGGTGGCAGAACCTCCGTC
CATCGACGCCGACCTTGTCACCCAGTTCGAAGTGGAGCTCTGCTGGTGTG
TGCAGCAGTTGCAAACTGCTCTCGACAGCGGAAAACTGGCGCAAAAAGTG
GCCGAAGATACTGCCAAGAACATAAAGGTACTAACCAGTTCAACAGCGCC
GCTCATCAGGAAGCGGCAGGTGATGAAGCTAGCCCTGGGCGACTACCGAG
CGAAGATGCAGCAGGAGGAGCAGAAGTTGCTACTAGCCTCCAGGCAAATC
AAATTCACACCTACGGCTGAATCATCCAAAAAGTCTAGCTTTGTAAAGAA
GTCGGCGCTTCTGTCATCTGGAAAGGACTTCCGCTTCAACTTTCCCTCGC
CCGCCGAAGACACCAGCTCAAAAGAGCCTCAACCAGTCCAGGACTTCGAT
CCCAGCAGCCTTCAACCAGCTGAAGCCGGAAGTCCGTTCAAGTTCAACTT
CACCATCGCGGAGGATTCGGCCAATGACATTAGTTTCAGCGGTCTGAACT
TGAATAAGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTA
AGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAG
GAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCC
GGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGTCATTA
CTGGATCTATCAACAGGAGTCCAGCGAGCTCGATATCAAATACGCCGCCC
TGCACTCATCGCAGTACTGTGTAATCATAGCATTCTGCGACATGAAGCAT
CACAAACGCATGATGAACTGATCGCAGCGCATCAGCACTTGTCGCTGCGT
ATAATATTGCCATGGTGAACGGGCAAAATTGTCATTGCAGGTTATCAAAC
TGTGAACCACCAGGATGCTGAAGCAAAACAATTCCATA
UFO05345.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14286-RA | 762 | CG14286-RA | 55..655 | 8..608 | 3005 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19024146..19024746 | 8..608 | 3005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:05 has no hits.
UFO05345.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:45 Download gff for
UFO05345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14286-RA | 55..658 | 8..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:30 Download gff for
UFO05345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14286-RA | 55..658 | 8..612 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:33 Download gff for
UFO05345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14286-RA | 55..658 | 8..612 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:33 Download gff for
UFO05345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19024146..19024749 | 8..612 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:30 Download gff for
UFO05345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14849868..14850471 | 8..612 | 99 | == | Plus |
