UFO05348.5prime Sequence
1044 bp (921 high quality bases) assembled on 2010-04-05
> UFO05348.5prime
CAGTCGACATGCCGGTTTCCCCTGGAGAGGGGGAAGTCAATGGCGGCGGA
GATGTGGCCAAGAACGACTCCAACTCGCAGCAATCGGTGGATGGAATCGA
TGCGTTCGCCGCCTGCCAGAAGCCGCGTCCGGACACCAGTTCCATGCCGG
TTCGCCAGTACCTCGACCAGACGGTGGCCCCCATTTTGCTGCACGGACTG
CAGGCTTTGGCCCGGGATCGCCCCAGTGATCCGATCAGCTACCTGGCCAC
CTATCTGCTGAAGAACAAGAACCGCTGCGATGAGGTCAAGACAGAAGAAA
ACGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGT
CATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGAGATC
CTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGGCGGC
AACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTACTGGA
TCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGCCCT
GCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACATGG
AAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGCGGCATCAGCAC
CTTGTCGCCTTGCGTATAATATTTGCCCATGGTGAAAACGGGGGCGAAGA
AGTTGTCCATATTGGCCACGTTTAAATCAAAACTGGTGAAACTCACCCAG
GGATTGGCTGAGACGAAAAACATATTCTCAATAACCCTTTAGGAAATAGG
CCAGGTTTCACCGTACACGCACATCTTGCGATATATGTGTAGAACTGCCG
GAAATCGTCGTGTATTCACTCCAGAGCGATGAAACGTTTCAGTTTGCTCA
TGGAAAACGTGTACAGGGTGAACACTTATCCATAATCACAGCTCACGTCT
TTCATTGCATACGAATTCCGGATGAGCATTCCTCAGGCGGGCAGAATGTG
GAATAAGGCGTTAACTGTGTCTTATTTTTCTTTACGGCTCTTAA
UFO05348.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:24:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpy-30L2-RB | 506 | CG11591-RB | 45..338 | 9..302 | 1470 | 100 | Plus |
| Dpy-30L2-RA | 550 | CG11591-RA | 89..382 | 9..302 | 1470 | 100 | Plus |
| Dpy-30L1-RA | 655 | CG6444-RA | 403..510 | 156..263 | 195 | 79.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:24:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4047156..4047449 | 302..9 | 1470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:24:52 has no hits.
UFO05348.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:37 Download gff for
UFO05348.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11591-RA | 84..387 | 1..310 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:47 Download gff for
UFO05348.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpy-30L2-RA | 84..387 | 1..310 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:28 Download gff for
UFO05348.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dpy-30L2-RA | 84..387 | 1..310 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 20:15:28 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-04 22:27:47 has no hits.
