UFO05349.5prime Sequence
931 bp (371 high quality bases) assembled on 2010-04-05
> UFO05349.5prime
CAATCGACATGTTCCTGAATGCCCTGCGAAGGATGCGCTGCCTGTGCGGC
GACAGGGAGATCAGTACCGAAGACATTGAACAGAGGGAGCCGGTAATGCT
GAACATCTACGACCTGTCCACCAACAACAACTACACTTTTCCGCTGGGCT
TGGGTGTCTTCCATTCCGGCGTCCAGTTGTACGGGCGAGAGTACTCATTT
TTGGCGCTCAATCTCTCCATTTCCGGCATCTTTGAGATTCATCCCTGCAA
TGGGCAGGAGGAGTTGGGCGAACACTTCCGTTTCCGGAAGAGCATTCTGC
TCGGCTACACCGACTTTACCTGCGCTGAAGTGAAGCGCGTTATCAACCTG
CTGGGCTTCGAGTTCCGCGGGACCAGCTACCACTTGACCAGCAAGAATTG
CAACCACTTCTCCAACTGCCTGGCGCATCTCGTCTGTGGCCGTAAAATTC
CGCGTTGGGTCAACCGCCTGGCCTACCTCATAACGTGTGTCCCATTCCTC
GAACGCTTTGTGGTCTCCAGTCCATCACATTACCCTCACTTCCGGCAATT
TCAGCTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAA
GTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGG
AGATCCTGGTCATGACTAGTGCTTGTATTCTCACCATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCACAGGAGTCCAAGCGAGCTCGATATCAATTACGTCCCGAC
TGCACTCATCGCAGTACTGATGTAATCATAAGCATCTGCCGACTGAGTCA
TCTGAACGGCATGATGATCTGATCGCAGCAGCATCAGCACTTGTCGCTGC
GATAATACTTGCTCATGCTGAATCGGGGGCG
UFO05349.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12231-RA | 711 | CG12231-RA | 122..670 | 9..557 | 2700 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19531073..19531621 | 557..9 | 2700 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:03:17 has no hits.
UFO05349.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:47 Download gff for
UFO05349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12231-RA | 1..558 | 9..566 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:00:38 Download gff for
UFO05349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12231-RA | 122..680 | 9..569 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:51 Download gff for
UFO05349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12231-RA | 122..680 | 9..569 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:51 Download gff for
UFO05349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19531063..19531621 | 9..569 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:00:38 Download gff for
UFO05349.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19425096..19425654 | 9..569 | 98 | | Minus |
