UFO05356.5prime Sequence
1093 bp (983 high quality bases) assembled on 2010-04-05
> UFO05356.5prime
CAGTCGACATGGCACTCGTGGCATATGCCGGAGCCACGCCCACTCCCGGC
GATGGGCGGATTGTGGGTGGCGAGGTGGCCACCATTCAAGAATTTCCCTA
TCAAGTATCCGTCCAGTTGCAAGGCCGGCACATATGCGGTGGAGCCATCA
TTGGCATCGACACCGTACTGACAGCGGCCCATTGCTTCGAGGATCCCTGG
AGCAGTGCAGATTACACAGTGCGAGTGGGTTCCAGCGAGCATGAGAGTGG
GGGCCATGTGCTCAGCCTGCGGCGAGTCATCGCCCACGGCGATTATAATC
CCCAGAGCCACGACAACGACCTGGCGTTGCTCATCTTGAATGGCCAGCTC
AATTTCACCGAGCACCTGCAGCCAGTGCCACTGGCCGCATTAGCGGACCC
ACCCACCGCGGACACCCGTCTCCAGGTCAGCGGTTGGGGTTTCCAGGCCG
AGGAGAGTGCAGTCAGCGGTGAAGTTGGAGTGTCTCCGCAACTTCGTTTC
GTGGACGTGGATCTGGTGGAGTCGAATCAGTGCCGGCGTGCCTATAGCCA
GGTGTTGCCCATAACCCGGCGGATGATCTGTGCCGCGCGTCCAGGTCGGG
ATAGTTGCCAGGGCGACTCTGGCGGACCACTGGTGGGTTACGCAGCGGAA
GAAGGTCCGGCCAGGCTATATGGCATCGTTTCCTGGGGCCTGAGCTGCGC
AAATCCCAACTTTCCAGGAGTGTACACCAATGTGGCTGCCTTCCGCAGCT
GGATAGATGAGCAGTTGGACGCCAGGGGATGGGATGAACTGCTGGCGGGC
TGGAGTAGATTGCAAGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGC
CCAGGTAAGTGGTCATATCATAATCATATCATAATCATAATCACAACTAG
CCTAGGAGAATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAA
ACGGCCGGCGGCAACCGAGCGTTCTGAACAAATCCGAATGGAGTTCTGGA
GGTCATTTACTTGAATCTATCACCAGAGTCCAGCGAGCTCGAATCCAATT
AGGCGGGCTGTCATCTATCGCAGATACGTGGTTGTATTCTTAG
UFO05356.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11192-RB | 960 | CG11192-RB | 45..851 | 9..815 | 4020 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:51:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20354217..20355023 | 815..9 | 4020 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:52:00 has no hits.
UFO05356.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:17:57 Download gff for
UFO05356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11192-RB | 31..840 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:47 Download gff for
UFO05356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11192-RB | 45..854 | 9..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:15 Download gff for
UFO05356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11192-RB | 45..854 | 9..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:15 Download gff for
UFO05356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20354214..20355023 | 9..819 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:47 Download gff for
UFO05356.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16241719..16242528 | 9..819 | 99 | | Minus |
