UFO05358.5prime Sequence
1098 bp (983 high quality bases) assembled on 2010-04-05
> UFO05358.5prime
CAGTCGACATGAATTCGACAAAAGCTTTGTTAAGCAGCAGGATAGTGGCC
TTCGGACTTGAAAATCTGGTGACGCGTCGCGGAATGAAGCAGTTACGTTT
GGATGAAATTCACTACAAACTCAACTCCAATCAAGAGCGAAACCACCAGA
GAACTTGGCCACAATCACAGATGCAGCCGCAGATTGAGGAGCGCATGGAT
GACACCAAATACAGGCCAGGTCGTTGGACGGAGCGGAAATATCAGGCCAC
CTGGCGGGAAGCTGTCATCCCAAATGAGGAAGCCCATAAGGAGGCGAAGG
ACTCGCGTTCACAGGAGGAGCGACCCCACATTCGTGAACTCCGCCGAACT
ACCGACCCCAATAGGCGCCTCCAGAGGATCGCAATGCCTGCTAAACAATT
CATCTCGCAGTTTATCTCCACCCAAAGCAAAAACAAAAGGCGTTACGTAG
AAGCTGCATCAGATCGAATGGCGTTTGATGGATACGCAAGCTTTCTAGAC
CATTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAA
TCATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGC
TTGGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAAC
AAATCCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCC
AAGCGAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTAC
TGTTGTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGC
ATGATGAACCTGATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATA
TATTTGCCCATGGTGAAACGGGGGCGAAGAGTTGTCATATTGGCCACGTT
TAATCAAACTGGTGAACTCACCCAGGATTGGCTGAGACCGAAAAACATAT
TTCTCATTAACCTTTAGGGAATAGGCCAGGGTTTCACCGTAACACGCCCA
CATCTTGCGAATTATTGTGAGAACTGCCGAATCGCCTGGATTCACTTCGA
ACGATGAACGTTCAGTTGCTCATGGAACGAGTACAAGGTAACCATTCC
UFO05358.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18449-RA | 765 | CG18449-RA | 120..596 | 9..485 | 2385 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8367332..8367808 | 485..9 | 2385 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:05:06 has no hits.
UFO05358.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:23 Download gff for
UFO05358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18449-RA | 116..601 | 1..492 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:08 Download gff for
UFO05358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18449-RA | 116..601 | 1..492 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:43 Download gff for
UFO05358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18449-RA | 116..601 | 1..492 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:43 Download gff for
UFO05358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8367332..8367812 | 1..485 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:08 Download gff for
UFO05358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4254837..4255317 | 1..485 | 99 | | Minus |
