UFO05363.5prime Sequence
1010 bp (903 high quality bases) assembled on 2010-04-05
> UFO05363.5prime
CAGTCGACATGGCAGAAGCGGCAAATGTGCGCCAGAACCTTCAAAATGTG
CCGTCGATCTTCGAAATTTCAGCGTCAGAGACGCTGGACAACCTGATTTA
CCCGGCACTGAGCAAGATATTCGACTACTTTGGACTACGCCTGGACTTTA
AACTATGGGGGAGTTTGAGGATTCAGGAGGAGCTGTCGCCATTGCTGACT
TGGCTGCTGCAGTACCTGTATCTGCGCAAGAGGGCCTCCTCTTTCGGTGA
GAGCTTTTACGGATTGCAAAGGACGGTCACAACCACTGGGGATCTGCTGA
ACCGCAGGCAGCAGTTCGCCTCTGCCACACTGCTAACCTTCATGCCTTAC
GTGGAGCGGAAGCTAAGGACCAGGATCACCAGGCACGAGGACACCAGTCC
CTGGGAGCAACGCCTTCTAAGCGCATTCCATGCTTTCCATGCCGCCAAGG
CGGCGCACACATTCTTTTACCTCGTAAAGTACGCCTCAAACCACTCGCCC
ATCTTCAGATTGTTGGGGCTGACCCTTCGCTATCCCAGCGAACCTCCCAA
AGAGGATCAGTGGACCTACGTGGTCCTAAAGATGCTGGAGGTCTTGGCCT
TCTTCCTGCAGTTCGTCCAGTGGTGGTACTCCAACGACCAGCGGCGGAAA
GTGGGTGGAACTCTGATAAATCCCGAAGCGATGCCGAGAAGCAGCTGCCC
AAGGAAGTGCAGCAGAGCCTTCCCCAGCGGGGAGAGTGCCAGTCTGCCTG
CTGTCCATCCAGACGCCCACTGCCTGCTCCGTTTCGGCTACGTCTTTGCT
GGAAGTGCATCGTAGCCACATGAGGAGCACGGCACCTGCCCGTCACCCAC
TATTCCCATCAGTCTGGACGACCTGGTGGCGCATCTACGAGACGCAGCTT
TTCTGACCATTCGTTTGGCGCGCGGGCCAGTAGTGGTCCTAATCTAACTA
AATCTAAACAAATCCACTAGCTAGAGATCCTGTCTGACAATGGCTGGATT
CCCCATAAAA
UFO05363.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pex12-RB | 2104 | CG3639-RB | 91..981 | 9..894 | 4240 | 99 | Plus |
| Pex12-RA | 1040 | CG3639-RA | 91..981 | 9..894 | 4240 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 816083..816973 | 9..894 | 4015 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:57:31 has no hits.
UFO05363.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:18:11 Download gff for
UFO05363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3639-RA | 1..894 | 9..897 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:45 Download gff for
UFO05363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex12-RA | 87..988 | 1..901 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:53 Download gff for
UFO05363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pex12-RA | 87..988 | 1..901 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:53 Download gff for
UFO05363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 816079..816980 | 1..901 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:45 Download gff for
UFO05363.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 816079..816980 | 1..901 | 98 | | Plus |
