UFO05374.5prime Sequence
997 bp (866 high quality bases) assembled on 2010-04-05
> UFO05374.5prime
CAGTCGACATGGCCAAACCGTTTTCTTTGACAGAGGAGAAGCTAGATGAC
CTATTTGTGCAGGAGGTTGTCAGTGTGGTGAAACTGGTGGACATGCTGCC
CGATAAAGATAACATTGTGCCCACATGCACCCGATGGCTCAACATCTTCC
AGCAGTCAACGCCGAAGGAACGCTTTTCCAGAAACTATATGCTACTGCTC
CTTCATAAACAACTCAATGATCACAAATCGTTGGGTTATCCATTTACGTG
GCCGGGCAGTTTCCAGTTGGATTTGCGCACTCTTCACCAAATGAGCCTAA
AACCGAATCCCGCAATCGGCAAAGATGTTGTATGCTGCAAATTTGATGAA
AGTTTGAATGAGGAGGAACAGTCTTCTTTTAGTTCATGCGAGAATATAGT
GGAGGCCAATCGTAGGTTGGTCAAAGAAAACGCTGCACTAACCAAGGAGT
CGATGGAGCTTCAATGTCTGATCGATAAGTTGCAGGTGAAACGCGCGGCG
GACAAACATGCCATTAAAAGGATAAATGATCAGATTTACATGCTGGACAA
GGAGAACCGATATCTGAAGCGAAATTTCGCCTGCTCCTCAATCAGCGCCC
TAAAAAGACTATGCAATGGACAGGATCCGGCGATGTTTTTTGACACCATG
TTCAGTGTTTTCTGCGAAGACGTATCAGACCACCAGCAGTGCAGCACTTT
AACGAACTCTTCAAACCTTGCTACATGCCCACATGGATCACTACCGGCGA
CAGCAGCGTGCTCTCTGATGGAGGAGCAAGCCAAAGTTTGACATCTGAAA
GCCCAGTGAGCAAGAGATACAAAATGTGTGGGCATGAAATGATGCCGAGA
GCCACGAGCTCACCCTCAGTGCATGAGAAATCTAGCCGTCTGCGAATGTC
CAGCCACCTTTAGCAAGCGAGCACAGAGCAGTACTCAGTCTGCAGCAACT
ACGAGCTTTGACGGAATGTGCAAGCTTCTGAACATCGTGCCCGGCCA
UFO05374.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14383-RA | 1136 | CG14383-RA | 11..994 | 6..958 | 4215 | 96.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12987605..12988501 | 890..6 | 3905 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:15:19 has no hits.
UFO05374.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-03 10:33:25 Download gff for
UFO05374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14383-RA | 1..875 | 9..872 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:36:56 Download gff for
UFO05374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14383-RA | 5..888 | 1..872 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:27 Download gff for
UFO05374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14383-RA | 5..888 | 1..872 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:27 Download gff for
UFO05374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12987624..12988502 | 1..872 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:36:56 Download gff for
UFO05374.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8813346..8814224 | 1..872 | 98 | | Minus |
