UFO05375.5prime Sequence
1048 bp (904 high quality bases) assembled on 2009-07-15
> UFO05375.5prime
CAGTCGACATGGATACTCTGTCACCCAATAATGGCTCTAAGTCGAGCTCC
AGCGGCAGTTCGGCGGCCAGTTCCTCCATGGATCTCGGCAAGCAGCAGCA
GAAGGAGAAGTTTCATCGTCACCCAAGGAATGGGCCCAAGAAGCTTTCCC
GCTCCAGGAGTTTGCTGCAATTGCTCAGCAGGCACCTGGGCAGGCACTTC
CACCACCAGAACCAGCAGAACGACACGGTCTACAGCAGCCAGGATGATAT
TAGGAGCAGCTCAACGGATTCCTTCAGCTTGAGCTACGAGCGTGGCAGCC
ACGAGTGCCCTATCAATGGTTCCTCCCTGGACCTGGAGCACACATCCCGG
ACCTCGAGCGGATCGGCCTGCTCCAGATACTCGCCCGGTCTGGATTACTA
CGATCAGCAGGGACACATCTATGTGGAGGCTGTCTACAGACCCGGCAGTG
CCATGGAGCAACTGCATCCGCAGCTGCACTTCGAGGAAGACACCAGCGAG
GAGGGTAGCAGCAACGAGGCGGAGGACGAGGTGGAGCTGCGCCACGACGA
GAACGAGAACGAGAACAGCAAGCCTCGATCCGCATCAGCCGCTTCCGCCA
AGTCATCGGGACTGCATCTCAGCCGAATTTCCATCTCCTCCTCGGTGAGC
CGCATCCTGCATCACTTCTCCAGTCCGACGGGAAATGCATCGATGCGCTC
GTTGTCCTGCAGCAGCACTCCACTGCGTCAGCCCAAGAAATCCCTGTCGC
CGAACAACTCGAACAACAGCAGCAGCAGCAGCTCCAGCTCCAAATTCTCC
CGTGCTCCCGCCCCAGAGAGGATAGAGCAGCAGAGCATCCTGCGACCGCC
AGTCCAGTACGTCTACATGAGGGCATGTCGGACTGTATTCCCGAGTGCCA
GCTATGCGTCTGCTATCCGTATACCTACAGCACATGTACGCAGCTTCTAG
ACATCGTTGGCCGCGGTCCAGTAATGTCTATCTATCATATCTATCCATTC
CCACTGCTAGGAATCTGCCTAACTATGCTGAATCCACATAAACGCCGG
UFO05375.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13054-RA | 1340 | CG13054-RA | 156..1098 | 8..939 | 4450 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16256094..16257036 | 939..8 | 4245 | 98.4 | Minus |
Blast to na_te.dros performed 2014-11-28 23:15:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6868 | 710..860 | 150 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6740..6822 | 707..792 | 143 | 66.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1067..1153 | 707..793 | 137 | 64.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6830..6913 | 752..833 | 135 | 65.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2329..2368 | 753..792 | 119 | 77.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2332..2371 | 753..792 | 119 | 77.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2335..2374 | 753..792 | 119 | 77.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2355..2430 | 707..788 | 116 | 65.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2338..2377 | 753..792 | 110 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6780 | 753..792 | 110 | 75 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2439..2476 | 755..792 | 109 | 76.3 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 8572..8633 | 739..795 | 109 | 69.4 | Plus |
UFO05375.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:01 Download gff for
UFO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13054-RA | 149..1098 | 1..939 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:15:58 Download gff for
UFO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13054-RA | 149..1098 | 1..939 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-29 00:05:01 Download gff for
UFO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13054-RA | 149..1098 | 1..939 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-29 00:05:01 Download gff for
UFO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16256094..16257039 | 1..939 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:15:58 Download gff for
UFO05375.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16249194..16250139 | 1..939 | 98 | | Minus |
