UFO05376.5prime Sequence
1024 bp (928 high quality bases) assembled on 2009-07-15
> UFO05376.5prime
CAGTCGACATGTCGGACCAAGAAGACGTAGTTGTAAAAAAAGAAAAAAAA
TGTATAGAAAATATTGATGAGAACGACGAAGAGCCCGATGATGTAGATTT
TAAGGACAGCGGAAAAATAAGCTCCTTGAAGGCCCTGGGTCCATTTATAG
CCGGCAAGGAGAATAGCCGCAACACGGTTTACCTCAGCGATGTTCCGGAT
ATTTGCAAGGATAAACCGTGCATGCTGGGCGTGGACGAAGCAGGGCGTGG
TCCCGTCCTGGGACCTATGGTATATGGGATCTCCTACTGTCCACTGGAAA
GTAACAAGGCTTTAGAGGACCTGGGATGCGCCGATTCCAAACAACTAACC
GAGGGGAAACGTGATATCATATTTAACGATATCAACACCAAGGAATATGC
GACCAGTTGCGTTGGCTGGGCCGTGGAGATCATATCGCCGAACACGATCA
GCACCAGCATGTACCGGCGGTCGAAGTGCTCCCTGAACGAAGTTTCCATG
GACTCGGCCATGGGCCTTATCCAACAGGCGATCGATGCGGGCGTCAATAT
AGCCGAGGTTTATGTGGATACGGTGGGTCCGCCGGAGAAGTACCAGGAGA
AGTTGCTCAAACGTTTCCCCAGCTTTAAAATCACCGTGGCGAAAAAAGCT
GACTCCACCTATCCAATAGTCTCTGCTGCTAGTATATGCGCCAAAGTCAC
CCGTGATCATGCCCTCAAGGTGTGGAGCTTCCCCGAGGGCTTGGTCATTA
AGATAACGAGTTCGGCAGTGGATATCCCGGAGATCCGGTCACAGAGATTT
CTGACCGAGTACATCGATCTAGTGTTTGGATTTCACGACTTGTGCGCTTC
AGTTGGTCCACCGCGGAAACGCACTGGCGACAGCTATGACATGGAGTTCG
ACAGCCGATCCGAGAAGCCCAGTACGCGGCACAGCTCACAAGTTCTTTAG
GCACACAATCGGCGAATAATCGAGGGAGTGCCGCTCTTAGCACGCATCTG
AGTCTTGAGTTGCTAGCTTCTGAC
UFO05376.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:59:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13690-RA | 1219 | CG13690-RA | 53..1055 | 9..985 | 4330 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 418725..419600 | 879..9 | 4090 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:59:57 has no hits.
UFO05376.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:02 Download gff for
UFO05376.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13690-RA | 36..1008 | 1..955 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:10 Download gff for
UFO05376.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13690-RA | 46..1018 | 1..955 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:47 Download gff for
UFO05376.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13690-RA | 46..1018 | 1..955 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:47 Download gff for
UFO05376.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 418637..419607 | 1..954 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:10 Download gff for
UFO05376.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 418637..419607 | 1..954 | 97 | | Minus |
