UFO05378.5prime Sequence
1073 bp (931 high quality bases) assembled on 2009-07-15
> UFO05378.5prime
CAGTCGACATGAGTATGGAATCCAAGTCGAAGCGGCGGTCCCCTCCAAGC
AGTACTCTTGAAGAAGAAGTTCCTGGAAAGACCATCCACCCTGAGGATCC
GAAAATTACATCTAAAAACTTCGAGAATCCCACAAAAGAAACTTCCATCC
AGAGCCCCATTAAGAACTCCATAAAACCATCGTGGAATCCAGAACCCAAG
ATCACTAGGACCTCCATATGGGACATTGAATCCGCAGGAGGGGATTCAAT
ACAAAATGATTGTCAAAGTGAATGTAACGTTGAAGATCAAGGTCATGAGC
AAGAGGTCACGTTGGAGACTAGGATATTTTCTGGAACCTCAGACCGCATT
GAACCGCACCGACATTACGGCGTCTATTTGTTGCGCAACCGCTTCGATGC
CATACAATTGCTCACCAGGAATACGAGCTCCAGTGCGGATGACTACGGTG
AGCGGAGGGTCATTTCGGAATACCGGGAAATGCGATGTGAATTCCGAGTC
TGGTCTCCCTTCCAATCCAAACTGGCAGCTGGAATAATGGGTGGTGTCAG
TGATTTGCATCTGCAAATTGGCTCAAAGGTCCTATACCTGGGAGCTGGGT
TTGGGCGATCGGTATCCCACATCTCGGATATAGTGGGTGACTCCGGAATG
GTTTATGCTGTGGAGCAGATTCCTTGGGCTGGTCGTCAGCTGACCATAAT
GGCCAATCGTCGTTCAAATATCGTACCCATAGTCGAGGATGCTACCATGC
CATATAAATACCGCTATGAGGTCCCGCTTGCATTGACATTATCTTCGCTG
ATCTTCCGCCTTCGGTTCTGATTCGAGCTCTGATGCTAAATGCTAGACAC
TTCCTGAACCCCGGTGGTCACTTCGTGACTATTTAAATTCGCCTACTAGT
CAAGTGTGTCTTTAATAAGATTCCTTTGCCGCGAAAGGAACTTTTAAGGA
AAGCACTGACAAGAATGTTCTATTGGAACCCTTAAGCCGTACCCTTTGTT
GGGCTGTACTTCGTAAGATTTTCTTGGCAGCTTTCAGACATTCGTTGGCC
GCGCCAGGATTGTCATTCATTCT
UFO05378.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:02:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10909-RA | 1173 | CG10909-RA | 63..1097 | 9..1017 | 4515 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:02:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12910302..12911230 | 932..9 | 4365 | 99.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:02:05 has no hits.
UFO05378.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:11 Download gff for
UFO05378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10909-RA | 55..1018 | 1..955 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:19:41 Download gff for
UFO05378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10909-RA | 55..1018 | 1..955 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:37:28 Download gff for
UFO05378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10909-RA | 55..1018 | 1..955 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:37:28 Download gff for
UFO05378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12910275..12911235 | 1..955 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:19:41 Download gff for
UFO05378.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8735997..8736957 | 1..955 | 98 | | Minus |
