UFO05380.5prime Sequence
1006 bp (862 high quality bases) assembled on 2009-07-15
> UFO05380.5prime
CAGTCGACATGCCTTACCACCGACTGAATATTTTGGGTCTGTTGATTCTA
TCTTTGGTCTTGGCCAAGGCGGATGTGGGCTACCATTACAGCAGACCAAC
GAGACCCACGGCTCCCTCGGCACCTTCGGGCGCAGGATCGGTGTATACGG
GTCACCAGTTCAGTGCGCTGCCCACCATCCATCCACTGCCTCCGATTCCG
GCACTTCCTCCACTGCCCACGGCCAGAGTTCCAATACCCAGGAGTCGTCC
CTCAGCTCCGGCTGCCAGCATCGTTAGTCATTATCTGCCACCGAAGCCGG
TGGTCTCCACATATATTCCACCGCCAGCTGCTGCACCCATCTCATCTATA
AGTTTCCACGGAACGCCCACTTTCAAACCCATCTACGGACCTCCACCGCC
GGCAAGGACTTCTCTTGCCACGCCCATCGTGGTGCCGCCCACGGGACCAG
CTCCACTGACAGCGGGAGGAAATCTGCGCATTCCCTTCGGCAAGCAGGCG
TTGATCTCGCCCGGAGAATCCTACGTGGCCAATGGCAGGCAGCTGAAGCA
ATATGCCGTCATCGAGATTATTGACAACGACATAGACGAGACCCCGGCTC
CATTCCTGTCCGGAACGAGTTTCTTCGATCGCTATGGAGCACATGTTGGT
GCTCCATCCGCCAATGGAATCCAGCTGGACTCACGGGCTAATTCCTTGCT
GCTGGAGCAGCAGCAGCTTGCCATCCAGCCCAGATCCCAGGGTGGTGCAT
CGGGAGGGGATGCCATTGCCTTGGATCGGGCGGCCTGGGCTTTGTGCGTT
TGCCCAACGGTATGTTTTATCTCGGCTCCGGATCCCTGGGCTACATCAGT
GGTCAGCAGCGGGGGGCCCACGTTCTGGAGCACGCCACTCGATCGGAATC
CACGTCGATGCCCTGCACTTCGTCATGGTCCGCTTGGGCGGAGTGGAACA
CCCTGCCTGAGTTCAAGGCAACTTTTTAGAACATCGCTTTGGCGCCCGGG
CCGGGT
UFO05380.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:00:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15414-RA | 1402 | CG15414-RA | 241..1200 | 9..967 | 4475 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:59:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3480985..3481916 | 937..9 | 4330 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:00:00 has no hits.
UFO05380.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:30:12 Download gff for
UFO05380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15414-RA | 210..1177 | 1..967 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:41:13 Download gff for
UFO05380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15414-RA | 233..1200 | 1..967 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:55:49 Download gff for
UFO05380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15414-RA | 233..1200 | 1..967 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:55:49 Download gff for
UFO05380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3480964..3481923 | 1..961 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:41:13 Download gff for
UFO05380.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3480964..3481923 | 1..961 | 98 | | Minus |
