UFO05384.5prime Sequence
1035 bp (934 high quality bases) assembled on 2010-04-05
> UFO05384.5prime
CAGTCGACATGCTGAACGGAAAATTCTACACGGGCTTGCCGCCCAAAATG
GTGGAGCGCCAGGCGGTGAAGGTGTGCAATCGCCAGGAGTCGCACTTCTT
CTGGCCAGACGATTCCCGAGCGGATTCCGCGGTGGAAACCCGAGCAAAGA
GGAGAAACAGCCAGCAGCTGGAGAGGCCTGTGGAAAGGATTACTTCCAAT
CAGAATGTATCCGACGAAGTGGACACACGGCGAATGTTTCACAAGGAGTT
TGCCAGTTCTTCCATACAGTTCTATGATAATCTGCAGTCTAATCCTGGAA
ATAAACCTTCATTGGCAAGGGGTCTACGCAGAGAAATAACCCCAAAACTA
ACCGAAGTGAGACCGCAGGAATCGGATAACAAAGCTGAGGACACCAGCAG
CCGTCGCCAGCAGGCTTACAGCTCCAAGATCCAGTTCTACGATTATGTAA
ACGAAGCAGATAACCTAACTCAAAATAACGCCAGGAGACCACAAATGGAC
TTGAATGACAAGCGCGAAGTGGAACTGAATTCCAAGAACAGTCCCAAGCT
GCAGGTCAAAAGAAATGTGCGCAGTTTCAGCGTGGAACTGGAGCCCAAGG
TCACCAAGAAACCCCTGAACGACAGTCCCGAGTGGCGGCGGCCACGCCCA
CTGCCCCTGCCCAAAAGGATACTGAAGCAAACGTCACAGGATCAGGACCC
GTACGACCATCTGGAAAGTCGAGTCCGAGATTGCAACTAACCCGAAGTCC
CGGACTGCCCAAAAAGCATGTGACCTACAACGAGGAGGCTGCCGAGTACG
CCTACTACGATGATCGGGTGGATCGCGATGATCGGAGATCGCGAGGATCG
TGAGGAGCCCACCTACGAAACTCGCTACCGTCAGCAGCCAATATGCCGAC
AGGAAGTCGCCAGCAGCAGCAGCAGCAGCACATCATCGCTCTTTATGGAA
ACTAGTCGAGCAGCCATTCATTATATATATTTCAGGCCACGCATGGTGGG
GAGATCTTTCTAATGCCACGACCACTCGAGTGGTA
UFO05384.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15546-RA | 1822 | CG15546-RA | 52..1020 | 8..968 | 4630 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30875179..30876135 | 958..8 | 4490 | 99.2 | Minus |
Blast to na_te.dros performed 2014-11-28 19:38:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dnet\R1A | 1757 | Dnet\R1A NEOR1A 1757bp | 4..45 | 567..608 | 111 | 73.8 | Plus |
UFO05384.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:18:21 Download gff for
UFO05384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15546-RA | 1..976 | 9..977 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:09 Download gff for
UFO05384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15546-RA | 44..1028 | 1..977 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:03 Download gff for
UFO05384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15546-RA | 44..1028 | 1..977 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:03 Download gff for
UFO05384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30875179..30876139 | 1..958 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:09 Download gff for
UFO05384.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 26700901..26701861 | 1..958 | 98 | | Minus |
