UFO05385.5prime Sequence
986 bp (852 high quality bases) assembled on 2010-04-05
> UFO05385.5prime
CAGTCGACATGAGTGCCCCAAACATGGATTGTGAACAGCGCGGCGATATA
GATAGCGTCTTCGGCTGGATCGCCAATCTTTGCAACAAAGAAACGCGTCT
CTGGGCGATGCTGGAGCTATTCGAAAGGCGCACCCACATTGACAGCCTAG
GACTCTTGCTATGGCATTCCTTTGGAGCTGTGAGTGGCTTGCTACAAGAG
ATTGTGTCAATATATCCGGCCATTTATCAAGAAATTGAATTAACCGGCCA
ACAGTCGCACCGGATTTGCACTGCCATTGGGCTGATTCAGGCTATGGCAT
CACATCCCTTCATTGGTATTCAACTCATACGATGCCAATTCATGTGCTAT
TTGATGCCATTGCTTAAAATGACTTCTCAAACTCGCGCCGTTGAGCATGT
TCGTCTCTCTGTCTTGGGCGTCATTTGCGGTCTACTGAAATCAGATCATC
CGGAGATCGTATCTTATTTTTTGGGCACTGAATTAATTCCACTTACCCTG
CGGCAGCTGGAGTTTGGTACCACAATGAGTAAGGTGCTCTGTGCATTTGT
CTTGTACCGCACCTTAGAACATGAAGTGGGCTTAAAGTTTGCCAGTCGAA
GACTGGCACGAAAGCTGCATCTGATCCATACTTTGGCCAGGGTTGTGCAC
CAACTCACACTGGAACCGGAGCCTAGGGTCCTTAAACATGTAGTAAGGAT
CTATTCTCGTCTGGCTGATCATCCCCAAAATCTGGAGCTGATCCTTAAGC
TATTGCCGGCTCAGATTCGGAACGGCTATTTTGCCAGGAAGGTTTAGTGG
GCTTCGAGAAGCGCTTCTCTAGAGCTAGCTGATCTACCGTAAGCTCAGTA
AAATGAGGAAAGGAAATGTTTGTGATGATGCCATGCCGGAAACATGCAAG
CTTTCTAAACATTCGTTGGCCCCGGGCCCAGGTAGTGTATATCAAATCAT
ATCATAATCTAATCCACACTAGCTAAGAGAATTCTG
UFO05385.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2053-RB | 1374 | CG2053-RB | 154..1042 | 9..892 | 4270 | 99.1 | Plus |
| CG2053-RA | 1231 | CG2053-RA | 154..1042 | 9..892 | 4270 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 32038483..32039329 | 9..853 | 4075 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:58:44 has no hits.
UFO05385.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:18:25 Download gff for
UFO05385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2053-RA | 111..1011 | 9..902 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:03 Download gff for
UFO05385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2053-RA | 111..1011 | 9..902 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:33 Download gff for
UFO05385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2053-RA | 154..1054 | 9..902 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:33 Download gff for
UFO05385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 32038483..32039347 | 9..868 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:03 Download gff for
UFO05385.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 27864205..27865069 | 9..868 | 99 | -> | Plus |
