UFO05392.5prime Sequence
1072 bp (946 high quality bases) assembled on 2010-04-05
> UFO05392.5prime
CAGTCGACATGGATAATGGGGAGGAGACCATGTTGCATCTGCCCAGCTAT
GCTGATCGCTATACGGACATTCCCCGGCTTATCCGATTGAAGTTCATTGC
CCAGGTCTGTCCGGAGCTAAGTGTTCTTGCCCTCGAGTTGGCCCTCAATC
ATGTGAAGACCACCTACAATGTCAAGTTGTACGACGAACTCTACAAAACA
CTGTGCGTTGAGGTGGACAGGAAGTACCCCAACCAGTCCAAGGGGAACGA
AGAACTTCATACCACTGGTGGAAGCGAGCCAAGTACGTCGAGTGGCAGGG
GGAGAGTTGTGGTTCCCTATGATTCCTACTGGGTGGAGGACAACATTATG
GAGGCCACTCTGATGCTTCAGGAACTAGACGCCGAACTGAACTTCAAGAA
ATCGAATTCGGGCAGCTCCTATGTGCGACGCATTCTAGAGGAGATCGGGG
ATCACCACGAGAAGAGTGGAAACTTGCAGATGGCGGTCAAGTTTTATGCT
CGAGCCAGGCCCTACTGTACCAGCAGCGAGAATGTCATCAATATGTTCCG
GAATCTGATTAGGGTATCAATTTATATGGAAAATTGGTGGCATGTCCTCA
CCTACATTGACGAGGCCAAGCAGTATGCCTATGGCTTTGAAAATCTGGCC
CAGGAGGTTCCAGCACGTCTAAGCTGCGTCGCCGGTTTGGCTCATTTGGG
CCTAAAGATATACAAGTCTGCTGCCCAATATTTCCTGAGTACTCCGTATG
GGCGTTACGACTACGATAAAATCGTGCACCCGAAGATGTTACTTTATATG
CTGGCCTTTGCGCTCTAGCCACTTTCGATCGGGAAACCTTACAGCTGACG
CTATCAACTCGGAGCATTTAGCCATTCTTTCAGCTTTCGCAAAATGTGGA
ACATATTGCCAAATTCTACGCGGGGGAATTCGATGCCTTGTATGACCTGT
TGCGCGGAAATCGAAAATCATGTTAGGCTGGATGTTTATTTTGTCTCCCA
TTAGGGCCTTTAAATTGTAATGCATGCTGAAAAAGGACCGAGATTAGACG
ATCTGAACCGAAATCAGCAGCT
UFO05392.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CSN1a-RA | 1301 | CG4697-RA | 96..1092 | 8..999 | 4720 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14762860..14763849 | 8..991 | 4480 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:37 has no hits.
UFO05392.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:04 Download gff for
UFO05392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 1..1007 | 9..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:55 Download gff for
UFO05392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 90..1103 | 1..1007 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:51 Download gff for
UFO05392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CSN1a-RA | 90..1103 | 1..1007 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:51 Download gff for
UFO05392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14762854..14763863 | 1..1005 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:55 Download gff for
UFO05392.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14762854..14763863 | 1..1005 | 98 | -> | Plus |
