UFO05393.5prime Sequence
1061 bp (949 high quality bases) assembled on 2010-04-05
> UFO05393.5prime
CAGTCGACATGCTGTCAGCTATTGTCTTAGTGTTAGTGCTTTTTCAAGCG
GCTTGTGGCTTCATCGTTACCCTGGATGCCCACGAGACGATGTGCTTCTA
CGATCATGCCAATGTCAGCGACAAGGTGACCGTGTCCTTCGAGGTAATGG
AAGGTGGCTTCAAGGATGTGGGCGTGGAGATTGCTGGACCAGACGACGAT
CGCCTGCACCACTCCAAGCAGGACACCATGGGCAGCTTCACCTTTACGGC
CATGAAAGAGGGACGGTACCAATTGTGCTTCGACAATAAGATGTCCACGA
TGACGCCCAAGATCCTAATGTTCCAATTTCACGTTGCCAGGGCCATTGAG
TTCTACATGGACTCCTCGAAGCGAGTTGACGACGTCATCGAGCAGGCGAC
GGTCCAATCGATGATCAACCAACTCTCCGCCAAACTGGGAGCCGTGAAAA
TGGAGCAGGAGTACATGCACTTTCGCTATCGCGGTCACTTGGAGGTCAGC
GATATGGTGGAACTGCGAGTCCTGGCGTGGTCTATATTTGGACCAATGAT
GCTGATCATTACGGCCGTTCTGGAGGTATACTACCTCAAGCATTTCTTCG
AAGTCAAGCGCGTGGTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGG
GCCCAGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAA
CTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAA
AAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCT
GAGGTCATTACTGGATCTATCACAGGAGTCCAAGCGAGCTCGATATCAAT
TACGCCCGCCCTGCACTCATCGCAGTACTGTTGTAATCATTAAGCATTCT
GCGACATGAGCCATCACCAACGGCATGATGACTGATCGCAGCGCATCAGC
ACTGTCGCTTGCGTTTAATATTTGCCATGTGAACGGGGGCAGAGTGTCAT
ATGCCGTTAATCAAACTGGTGACTCACAGAATGCCTGAAACGAAACATTT
CCATACTAGAA
UFO05393.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9308-RA | 823 | CG9308-RA | 78..686 | 9..617 | 3045 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22034921..22035529 | 9..617 | 3045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:39:25 has no hits.
UFO05393.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:08 Download gff for
UFO05393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9308-RA | 78..692 | 9..624 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:25 Download gff for
UFO05393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9308-RA | 78..692 | 9..624 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:19 Download gff for
UFO05393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9308-RA | 78..692 | 9..624 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:19 Download gff for
UFO05393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22034921..22035535 | 9..624 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:25 Download gff for
UFO05393.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17922426..17923040 | 9..624 | 99 | == | Plus |
