UFO05395.5prime Sequence
1063 bp (960 high quality bases) assembled on 2010-04-05
> UFO05395.5prime
CAGTCGACATGTCGCGGAAGTGCGAGTTCCTGGTGGTCGGTGGAGGTATT
GCTGGCGTCAGCTGCGCCGAGTCCCTGGCCATCTACCGACCCAATGCCTC
CATTCTACTGCTCACGGAGTCCAGCATCGTGAAGAGTGTGACCAATTTGG
TGCCGGTGGCTCGCTATCTGCATAAGTTCGACGTTCGGGAACAGGATGTC
TCCGAAATGGGAGCTAGTTTTCAGACACTAGTGGATCGCCTGGATCACAT
CAACAGCAGGGAGCATTGCATCCGCACTAAAGCGGGTCTGGAGATCAAGT
ATCGCTATTTGTGCCTCTGCACCGGTGGAACACCCAAATTGTTCTCCGGC
AAAGTAGTAAATCCCCTTGTCATTGGCATTCGGGACACGGACTCTGTACA
GCTGCTGCAGCGAAAGTTGGCGACAGCTAAGGATGTCCTGATTTTGGGCA
ATGGCGGCATTGCCAGTGAGTTGGCCTACGAGCTGAAGGATGTAAATGTC
CACTGGGTGGTTAAAGATTCTCACATCTCGGCCACATTTGTGGATCCCGG
AGCAGCCGAGTTCTTTCACATAGCCATGAATGAATGTAATGCGAAGGATT
CCTCTCCGGTTGTGGCTATTAAGCGAATGCGGTACAGTGAAGTGCTGCCC
AAGGAGCAGACTAACAACCATGGAGCTGCATTGGGTCCGGACTGGCATCG
CAGCGTCGACTTGAGTGGAGCACGTGAAGGGGAAGAGAACCGCCTACCAA
AGATCTATTACAAATCTCGCATAAGCAGCGTTCATGATCTCGCCGACGAC
GCAGTGCTATAGTCAAGTTGGAGCATGAGATGGGAGCTTTCAGCAGTTGA
CCTGTGACTTTATTGTTTCCGCAACGGGAGTTTGGCCGAATACCGACTAC
ACGTGTGATTCCCCCCTTCAATTTTCCGACGATGGTGCAATATCGGTGGG
ATGAAATAATGCGTAACGAATCTTGGTGGATGTCTTTGCCGCCGTGAATG
TGGCACAGCCAAACTGGCCAACCGCATGACTGTTTCAGATGCCCCTTGTG
ACCAGGCTCGCAA
UFO05395.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10721-RB | 1572 | CG10721-RB | 113..1168 | 9..1061 | 4770 | 97.6 | Plus |
| CG10721-RA | 1541 | CG10721-RA | 82..1137 | 9..1061 | 4770 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20091693..20092677 | 9..994 | 4585 | 98.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:31:56 has no hits.
UFO05395.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:18:24 Download gff for
UFO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 1..1004 | 9..1012 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:35:22 Download gff for
UFO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 82..1085 | 9..1012 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:12:19 Download gff for
UFO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10721-RA | 82..1085 | 9..1012 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:12:19 Download gff for
UFO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20091693..20092696 | 9..1012 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:35:22 Download gff for
UFO05395.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20091693..20092696 | 9..1012 | 98 | | Plus |
