UFO05410.5prime Sequence
1110 bp (989 high quality bases) assembled on 2009-07-06
> UFO05410.5prime
CAGTCGACATGGCACTTTCCGCAACGAAGGACACTAGTCCATGGACCAAC
ATGGTGAAGAGGGTAACAGCGAGCAAATACGATGTAGTCTCGGTCAAGAC
GCTGCTGATGTTTATCAACAGCAAACTGGATTGCGAATTGCGAGGCTTTG
AGGATCTGAAAACAGGAGCAGTATATTGCCAACTGATGCACAGACTCTTT
CCCAATTCGATACAAATTCATAAGGTCAAGTTTTATACGAACGACATCAG
CGACTTTCAGTTAAATTTCCGGTTACTAAACAATTGCTTTCAAAAACTAA
GAGTAACCGTTTATATGCCAGTGCATGAGTTAACTCTGGGACACAATCAA
GTGGTCTTCTGCAATTGGATATACAAGTTCTATGAAGCAAACGACAAGGG
GAACGAATACGATGCCAGAAAGGTGAGAAAAGGCTCGCCAATCGGTTTAG
ACAATAGTTATAAGGTAGCCTCCATCTCAACTGGCAGCACCTGTTCAGTG
CATAAATGCCAGTCGATGGTCTTTAATTATGCAAAAAAGCCCGTCCGATT
CGAGAGGCAAAACAGCCTCGATGCTCTATCATTCAGACCGGGCATCTTTA
AGAGTATTCGTAGGGAGAAGCCAACCGAACAGGCGAATCCAGAACCACAG
CAGACAAAGAATATCAAAAAGTCCTCACAATTCCTTGCCGAGAGCAAGCA
CGTTTCTCTGCCATCGGATAGCGAAGATGAGTTGGAACTTAAAGCCCAAA
AACGTTATTTGCAAGATCAGTTTGTGAAAAAGCTCAATAGCAGTAAGAAT
GATGAGAAGACTGGCACAGACGCAACGTCAAAAATCTCGGAAATTCCAAG
ACCAAATCCAGAAAACGAGCAACTAAACACTGTATGCGAAAAGTATGAGC
AGGAAACGAGTGATCTGCGATCCAATCTTTATTTTGATCGACAAACCTAG
ATTACAGCTACAAACTTACAGATTGATAAGGAAAGCTGACCAACAGTTGT
CCCCGCGTGGGAGTCATATTAAACAAACACGATTTAATTCAGAAAAAGCT
GTTTCTAAATTAAGAAATTGCTATGAACAAGCACAACGGCAGAGTGCATC
CCGCGTAAAG
UFO05410.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31907-RB | 1574 | CG31907-RB | 78..1186 | 8..1110 | 5080 | 98.1 | Plus |
| CG31907-RA | 1470 | CG31907-RA | 78..1186 | 8..1110 | 5080 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7059649..7060710 | 1067..8 | 4815 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:20:41 has no hits.
UFO05410.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:11 Download gff for
UFO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 72..1186 | 1..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:28:46 Download gff for
UFO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 72..1186 | 1..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:19:31 Download gff for
UFO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31907-RA | 72..1186 | 1..1110 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:19:31 Download gff for
UFO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7059602..7060715 | 1..1110 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:28:46 Download gff for
UFO05410.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7059602..7060715 | 1..1110 | 97 | | Minus |
