UFO05412.5prime Sequence
557 bp (362 high quality bases) assembled on 2009-07-06
> UFO05412.5prime
CAGTCGACATGAAGGGCGGCAACTACACCAGCCTCGGCACGTGCAGTGGC
ATCAATGTCAGTGGCAACGTGGCCGGCACCCGCAAGATGTCACTGGGCAA
ATCCATTAAAATGTACCTGACCATTTTCATCCTGACCACCTGCATTTATA
TGGCGCTCTATCAGTACCACATATCCCGTGAACCCTTCGCCGCCAGCGAG
GTTGTCAAGCCGCCCCTGTACATAATCACGCCCACCTACCGACGACCCGA
GCAGCTGGCGGAGCTCACCCGGCTGGGATATACGCTGAAAACATGGGGGG
GAATCTACTCTGGCTGGGTCATCGAGGATTGCCAAACAAAGAACGAAATC
CCGCTGGGGGGGGCCCCCCACCTTTTGGGACCCCGCATCGGAAAATTGGC
CCCTAACCAAAGTTACATGGGGGGGGGCCCCCCCCCTGTGCCCGGAAAAA
AATTTCCCAACCCCAAAACCAAAAAAAAAGGGCCAAACCCCCCCGGGGGG
GGGTCCCCCCCAAATCCGGAAAAATGGGGGGCCCCCCCAAATTTTTTTGG
GGGCGGA
UFO05412.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-P-RE | 3161 | CG6207-RE | 747..1069 | 9..335 | 1505 | 98.2 | Plus |
| GlcAT-P-RB | 3427 | CG6207-RB | 1013..1335 | 9..335 | 1505 | 98.2 | Plus |
| GlcAT-P-RC | 3266 | CG6207-RC | 852..1174 | 9..335 | 1505 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11183634..11183834 | 209..9 | 1005 | 100 | Minus |
| 3L | 28110227 | 3L | 11179600..11179718 | 329..208 | 430 | 95.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:08:01 has no hits.
UFO05412.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:17 Download gff for
UFO05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-P-RB | 980..1323 | 9..361 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:21 Download gff for
UFO05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-P-RC | 852..1195 | 9..361 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:41 Download gff for
UFO05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-P-RC | 852..1195 | 9..361 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:41 Download gff for
UFO05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11179574..11179716 | 210..361 | 92 | <- | Minus |
| 3L | 11183634..11183834 | 9..209 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:21 Download gff for
UFO05412.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11172674..11172816 | 210..361 | 92 | <- | Minus |
| arm_3L | 11176734..11176934 | 9..209 | 100 | | Minus |
