UFO05414.5prime Sequence
1116 bp (1013 high quality bases) assembled on 2009-07-06
> UFO05414.5prime
CAGTCGACATGTACGAACTGAAGACTCTGCTGCCGCAATTCGACATAAAG
CTGCCCACCTGCATGTATCCTCTCAAGAACGTTAGCCTGGCGGCGGATTC
CTTGGCCAGCGGCTCCTCCACATCCGCATCCACATCCGCGTCCACATCAT
CATGCGACGATACGGCATCAGTGGCCGCCCGACAGGAGAAGGTTCTCAAG
CAGCTGGAGGAGCTGAAGGCGCAGCTGGGACAAATCCGGGCGGGACTTGG
TGTTTGTGGCAAGACTTTCCAGCACACGACTGCTTTCCAGAATGGTGGAT
TAAAGGAGGTGCCACTGCAGGATGTCGTCATCAATGGACATCCCAACTTC
ATACCCTATGCCTTGTTGGCCCTGAAAAATGCCTGGCGCAATCTGTACAC
TATTGATGTCAAGACCTTTACGCACTCTACGATGGCCGACATTGGACCAG
CAGCACGGGAATTCGAGGCCAACTTGGCGAAGGTTCCAGTAAACCCTGCT
TTGCCCAAGATTAGTGTGACGCTCATCTGGAAGAACTGCGAACACACCGA
GATGATCAGCTCGCCCACCATGTACGTGCCCATCTACGGAGAGGTGAACA
TCATTCGCTATCTGGGCCGTGTGGGTCCAGCCGAGTATCGTTATGAGGGC
TCTCCGCTCTGCAATGAGATCGACCTTGTCCTGCACATTTGCTACCAACT
GCTGCGCTGCAACACGCACAAAACGCAGGTGGCCATGGTGCGCCTGCTGG
ACAAGCGACTGCAGAAGCAGCAGTATTTCGGTGGATCCCAGATGTCGGTG
GCGGATGTCGGTGTCTACAGCTCACTGATACGCATGCCAGCTGTTACCGA
GAAGGATCTGACGCCTGCGCTAGTGGCTTGAGAAAAGGCCAAGCTCGTGT
TCAAATTGCAGCTTTCTAGACCATTCGTTTGGCGCCGCGGGCCCAGGTAG
TGTCATATCATATCATATCATATCATATCACACTAGCCTAGAGATCCTGG
TCATGACTAGTGCTGATCCCCCAATAAAAACGCCCGGCGCACCGAGCGTT
CTGACAATCGATGGAGTTCTGAGTCATACTGAATCTATCACCGGATCAAG
CGTCCGAATTCATTAG
UFO05414.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12304-RB | 1051 | CG12304-RB | 98..1000 | 9..907 | 4410 | 99.4 | Plus |
CG12304-RA | 1150 | CG12304-RA | 344..1099 | 156..907 | 3675 | 99.3 | Plus |
CG12304-RA | 1150 | CG12304-RA | 98..244 | 9..155 | 735 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15584923..15585265 | 538..880 | 1700 | 99.7 | Plus |
3L | 28110227 | 3L | 15584638..15584869 | 307..538 | 1160 | 100 | Plus |
3L | 28110227 | 3L | 15584287..15584441 | 156..310 | 775 | 100 | Plus |
3L | 28110227 | 3L | 15583735..15583882 | 9..156 | 740 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:58:56 has no hits.
UFO05414.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:36 Download gff for
UFO05414.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RB | 85..995 | 1..907 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:12 Download gff for
UFO05414.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RB | 90..1000 | 1..907 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:37 Download gff for
UFO05414.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12304-RB | 90..1000 | 1..907 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:37 Download gff for
UFO05414.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15583727..15583881 | 1..155 | 97 | -> | Plus |
3L | 15584287..15584439 | 156..308 | 100 | -> | Plus |
3L | 15584640..15584868 | 309..537 | 100 | -> | Plus |
3L | 15584923..15585296 | 538..907 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:12 Download gff for
UFO05414.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15576827..15576981 | 1..155 | 97 | -> | Plus |
arm_3L | 15577387..15577539 | 156..308 | 100 | -> | Plus |
arm_3L | 15577740..15577968 | 309..537 | 100 | -> | Plus |
arm_3L | 15578023..15578396 | 538..907 | 98 | == | Plus |