Clone UFO05414 Report

Search the DGRC for UFO05414

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:54
Well:14
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/TranscriptCG12304-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05414.5prime Sequence

1116 bp (1013 high quality bases) assembled on 2009-07-06

> UFO05414.5prime
CAGTCGACATGTACGAACTGAAGACTCTGCTGCCGCAATTCGACATAAAG
CTGCCCACCTGCATGTATCCTCTCAAGAACGTTAGCCTGGCGGCGGATTC
CTTGGCCAGCGGCTCCTCCACATCCGCATCCACATCCGCGTCCACATCAT
CATGCGACGATACGGCATCAGTGGCCGCCCGACAGGAGAAGGTTCTCAAG
CAGCTGGAGGAGCTGAAGGCGCAGCTGGGACAAATCCGGGCGGGACTTGG
TGTTTGTGGCAAGACTTTCCAGCACACGACTGCTTTCCAGAATGGTGGAT
TAAAGGAGGTGCCACTGCAGGATGTCGTCATCAATGGACATCCCAACTTC
ATACCCTATGCCTTGTTGGCCCTGAAAAATGCCTGGCGCAATCTGTACAC
TATTGATGTCAAGACCTTTACGCACTCTACGATGGCCGACATTGGACCAG
CAGCACGGGAATTCGAGGCCAACTTGGCGAAGGTTCCAGTAAACCCTGCT
TTGCCCAAGATTAGTGTGACGCTCATCTGGAAGAACTGCGAACACACCGA
GATGATCAGCTCGCCCACCATGTACGTGCCCATCTACGGAGAGGTGAACA
TCATTCGCTATCTGGGCCGTGTGGGTCCAGCCGAGTATCGTTATGAGGGC
TCTCCGCTCTGCAATGAGATCGACCTTGTCCTGCACATTTGCTACCAACT
GCTGCGCTGCAACACGCACAAAACGCAGGTGGCCATGGTGCGCCTGCTGG
ACAAGCGACTGCAGAAGCAGCAGTATTTCGGTGGATCCCAGATGTCGGTG
GCGGATGTCGGTGTCTACAGCTCACTGATACGCATGCCAGCTGTTACCGA
GAAGGATCTGACGCCTGCGCTAGTGGCTTGAGAAAAGGCCAAGCTCGTGT
TCAAATTGCAGCTTTCTAGACCATTCGTTTGGCGCCGCGGGCCCAGGTAG
TGTCATATCATATCATATCATATCATATCACACTAGCCTAGAGATCCTGG
TCATGACTAGTGCTGATCCCCCAATAAAAACGCCCGGCGCACCGAGCGTT
CTGACAATCGATGGAGTTCTGAGTCATACTGAATCTATCACCGGATCAAG
CGTCCGAATTCATTAG

UFO05414.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:58:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG12304-RB 1051 CG12304-RB 98..1000 9..907 4410 99.4 Plus
CG12304-RA 1150 CG12304-RA 344..1099 156..907 3675 99.3 Plus
CG12304-RA 1150 CG12304-RA 98..244 9..155 735 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:58:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15584923..15585265 538..880 1700 99.7 Plus
3L 28110227 3L 15584638..15584869 307..538 1160 100 Plus
3L 28110227 3L 15584287..15584441 156..310 775 100 Plus
3L 28110227 3L 15583735..15583882 9..156 740 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:58:56 has no hits.

UFO05414.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:21:36 Download gff for UFO05414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12304-RB 85..995 1..907 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:24:12 Download gff for UFO05414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12304-RB 90..1000 1..907 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:47:37 Download gff for UFO05414.5prime
Subject Subject Range Query Range Percent Splice Strand
CG12304-RB 90..1000 1..907 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:47:37 Download gff for UFO05414.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15583727..15583881 1..155 97 -> Plus
3L 15584287..15584439 156..308 100 -> Plus
3L 15584640..15584868 309..537 100 -> Plus
3L 15584923..15585296 538..907 98 == Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:24:12 Download gff for UFO05414.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15576827..15576981 1..155 97 -> Plus
arm_3L 15577387..15577539 156..308 100 -> Plus
arm_3L 15577740..15577968 309..537 100 -> Plus
arm_3L 15578023..15578396 538..907 98 == Plus