UFO05432.5prime Sequence
1148 bp (994 high quality bases) assembled on 2009-07-06
> UFO05432.5prime
CAGTCGACATGCGCAATTATCTCTGGTTAGCAGTGCTCCTGGTGGTGGCC
ACCACCTGCATCAAGGCCAAGCCGCTGGTCTCCTTCGGTGTCAGCTACCA
GCAGCCTTACCTGGGCCCCCAGCCAGAATCCTACTACTACGGAGGACGGT
ACCCGGCTGGTGGCTACTACAACAACTACCACAACAGCCCGGGTCCGTAC
GGCTACCCCTATCCGTATGCCAATCGCTATGGTGCCCTCGATCTCGGAAT
CGGCGCCCTGTCGCTATCGTCGTTCCTGCTCGCAAGCTTTCTAGACCATT
CGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATCAT
AATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTTGG
ATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAAAT
CCAGATGGAGTTCTGAGGTCATTACTGGATCTATCAACAGGAGTCCAAGC
GAGCTCGATATCAAATTACGCCCCGCCCTGCCACTCATCGCAGTACTGTT
GTAATTCATTAAGCATTCTGCCGACATGGAAGCCATCACAAACGGCATGA
TGAACCTGAATCGCCAGCGGCATCAGCACCTTGTCGCCTTGCGTATAATA
TTTGCCCATGGTGAAAACGGGGGCGAAGAAGTTGTCCATATTGGCCACGT
TTAAATCAAAACTGGTGAAACTCACCCAGGGATTGGCTGAGACGAAAAAC
ATATTCTCAATAAACCCTTTAGGGAAATAGGCCAGGTTTTCACCGTAACA
CGCCACATCTTGCGAATATATGTGTAGAAACTGCCGGAAATCGTCGTGTA
TTCACTCCAGAGCGATGAAAACGTTTCAGTTTGCTCATGGAAAACGGTGT
ACAGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTCATGCCATAC
GAAATCCGGATGAGCATTCATCAGGCGGGCAAGAATGTGAATAAAGGCCG
GATAACTTGGTGCTTATTTTTCTTTACGGTCTTTAAAAGGCGTAATATCA
AGCTGAACGTTTGTTATAGGTACATTGGAGCAACTGACTGAATGCTCAAT
GTTCTTTACAATGCCATTGAATATCACGGGGAATCCAGGAATTTTCTC
UFO05432.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:52:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13053-RB | 620 | CG13053-RB | 297..569 | 9..281 | 1365 | 100 | Plus |
| CG13053-RA | 358 | CG13053-RA | 35..307 | 9..281 | 1365 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:52:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16259088..16259343 | 281..26 | 1280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 21:52:06 has no hits.
UFO05432.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:18:38 Download gff for
UFO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13053-RA | 29..307 | 1..281 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:42:51 Download gff for
UFO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13053-RA | 29..307 | 1..281 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:17 Download gff for
UFO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13053-RA | 29..307 | 1..281 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:17 Download gff for
UFO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16259088..16259342 | 27..281 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:42:51 Download gff for
UFO05432.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16252188..16252442 | 27..281 | 100 | <- | Minus |
