UFO05445.5prime Sequence
340 bp (293 high quality bases) assembled on 2009-07-06
> UFO05445.5prime
CAGTCGACATGCCGGAGGCGCTACACTTTACATCGATCTTTGATCTCATC
ATCAAGAGCGCGATGCCATGGTTTGGCATGGACATCGGCGGAACCCTCAC
CAAGCTGGTCTACTTCGAGCCCAAGGACATAACGCCGGATGAGCAGGATC
GCGAGGCTGGCATTTTGCGGAATATCCGACGCTACTTGACCAAAAACTCG
GCGTACGGCAAAACCGGACATCGTGATACGCACCTACAGATGGACAATGT
CGAGATACCCAAAAGACGCGGCTCCTTGCATTTCATTCCCTTCCAGAACA
ACGGACATGGGAAACTTCCATATCCGCTTGGCCAGCAAAA
UFO05445.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
fbl-RA | 1866 | CG5725-RA | 335..660 | 9..337 | 1480 | 97.3 | Plus |
fbl-RG | 2352 | CG5725-RG | 412..687 | 59..337 | 1230 | 96.8 | Plus |
fbl-RB | 1910 | CG5725-RB | 426..704 | 56..337 | 1230 | 96.5 | Plus |
fbl-RG | 2352 | CG5725-RG | 335..386 | 9..60 | 260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 20388668..20388847 | 60..239 | 900 | 100 | Plus |
3L | 28110227 | 3L | 20389913..20389994 | 237..319 | 305 | 94 | Plus |
3L | 28110227 | 3L | 20387950..20388001 | 9..60 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:52:49 has no hits.
UFO05445.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:18:49 Download gff for
UFO05445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbl-RA | 331..659 | 1..336 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:17:09 Download gff for
UFO05445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbl-RA | 331..659 | 1..336 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:41 Download gff for
UFO05445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
fbl-RA | 331..659 | 1..336 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:41 Download gff for
UFO05445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 20387946..20388001 | 1..60 | 93 | -> | Plus |
3L | 20388669..20388847 | 61..239 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:17:09 Download gff for
UFO05445.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 20381046..20381101 | 1..60 | 93 | -> | Plus |
arm_3L | 20381769..20381947 | 61..239 | 100 | -> | Plus |