Clone UFO05445 Report

Search the DGRC for UFO05445

Clone and Library Details

Library:UFO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2008-06-20
Comments:BD Creator expression clones with C-terminus FLAG HA tag for transgenic expression using PhiC31 integrase system
Original Plate Number:54
Well:45
Vector:pUAST-CFLAGHA-BD-PHI
Associated Gene/Transcriptfbl-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

UFO05445.5prime Sequence

340 bp (293 high quality bases) assembled on 2009-07-06

> UFO05445.5prime
CAGTCGACATGCCGGAGGCGCTACACTTTACATCGATCTTTGATCTCATC
ATCAAGAGCGCGATGCCATGGTTTGGCATGGACATCGGCGGAACCCTCAC
CAAGCTGGTCTACTTCGAGCCCAAGGACATAACGCCGGATGAGCAGGATC
GCGAGGCTGGCATTTTGCGGAATATCCGACGCTACTTGACCAAAAACTCG
GCGTACGGCAAAACCGGACATCGTGATACGCACCTACAGATGGACAATGT
CGAGATACCCAAAAGACGCGGCTCCTTGCATTTCATTCCCTTCCAGAACA
ACGGACATGGGAAACTTCCATATCCGCTTGGCCAGCAAAA

UFO05445.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:50
Subject Length Description Subject Range Query Range Score Percent Strand
fbl-RA 1866 CG5725-RA 335..660 9..337 1480 97.3 Plus
fbl-RG 2352 CG5725-RG 412..687 59..337 1230 96.8 Plus
fbl-RB 1910 CG5725-RB 426..704 56..337 1230 96.5 Plus
fbl-RG 2352 CG5725-RG 335..386 9..60 260 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:48
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 20388668..20388847 60..239 900 100 Plus
3L 28110227 3L 20389913..20389994 237..319 305 94 Plus
3L 28110227 3L 20387950..20388001 9..60 260 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:52:49 has no hits.

UFO05445.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:18:49 Download gff for UFO05445.5prime
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 331..659 1..336 96   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:17:09 Download gff for UFO05445.5prime
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 331..659 1..336 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:41:41 Download gff for UFO05445.5prime
Subject Subject Range Query Range Percent Splice Strand
fbl-RA 331..659 1..336 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:41:41 Download gff for UFO05445.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 20387946..20388001 1..60 93 -> Plus
3L 20388669..20388847 61..239 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:17:09 Download gff for UFO05445.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 20381046..20381101 1..60 93 -> Plus
arm_3L 20381769..20381947 61..239 100 -> Plus