UFO05457.5prime Sequence
1107 bp (1007 high quality bases) assembled on 2009-07-06
> UFO05457.5prime
CAGTCGACATGGGCTCGGTAGGAAGTCGTCAGCTCAACCCCGTCCAACTG
TGTGACCACCAGCAGGCCACAGGGCTGTCCGCAGAGCAGCTAGAGCAGCT
GCACACGCGGTTCCGCAGCCTGGATCGCCACCAGCGCGGCTATTTGACGC
CCACCGACTTGCTGCGCATTCCGCAGCTATCCCTCAACCCGCTTCACCGC
CAGATCATCGACGGCTTCTTCCCCAGCCGTGACCCCAGCGCGCGTATCGG
TTTCAAGCAGTTCGTGGACACTTGCTCCACCATTTTGGTGCCACAGTTTG
GACGCGGTTCAGTGAGGCGGCGCGACGGGCGTGTTCAGAAGCTTCAACTC
CTGTCCAAGATGTTTGACACGAGGCGCAGCGGCTGCATCACACGCTCCGA
CTTCCGCCAGATCATGCGCAGCATTGTCAATCTGGCCTGGAGTCAGCAAC
AGGATCAGGAACGTCAGGAGGGGCTTTCCGAGAACCGTTTGCCTGAGGTG
GAGGCCGAGTTGCAACTTTTAGAGCATCAGGCCTTTGGCTTCTGCTGCGA
CCATATCTCATATGGGGAGTTCGAGAAGCGCCTGTTTAGTGTGGACGTCG
ACAGACGGCTGTCGATCGCCAAGTGGCTGGAGGACGATGACGAGGCCGAT
GCCGAGATGGTACTGCCAGTTGGCTCAGGCCCGGCAAGCTTTCTAGACCA
TTCGTTTGGCGCGCGGGCCCAGGTAAGTGGTCATAATCATAATCATAATC
ATAATCATAATCACAACTAGCCTAGGAGATCCTGGTCATGACTAGTGCTT
GGATTCTCACCAATAAAAAACGCCCGGCGGCAACCGAGCGTTCTGAACAA
ATCCAGATGGAGTTCTGAGTCATTACTGGATCTATCAACAGGAGTCCAAG
CGAGCTCGATATCAAATTACGCCCGCCCTGCCACTCATCGCAGTACTGTG
TATTCATAAGCATTCTGCCGACTGGAAGCAATCACAAACGCATGATGAAC
CTGATCGCAGCCGCATCAGCACCTGTCGCTTGCGTATAATATTTGCATGT
GAACGGGGCAGAAGTTGTCCATATGCCAGTATCAACTTGGTGTAATCGCA
GATGCTG
UFO05457.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32812-RB | 980 | CG32812-RB | 80..755 | 8..683 | 3380 | 100 | Plus |
| CG32812-RA | 1599 | CG32812-RA | 699..1374 | 8..683 | 3380 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1288045..1288720 | 8..683 | 3380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:56:58 has no hits.
UFO05457.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:20:02 Download gff for
UFO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 1..678 | 9..687 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:24 Download gff for
UFO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 691..1380 | 1..689 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:35:31 Download gff for
UFO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32812-RA | 691..1380 | 1..689 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:35:31 Download gff for
UFO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1288037..1288726 | 1..689 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:24 Download gff for
UFO05457.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1182070..1182759 | 1..689 | 99 | == | Plus |
