UFO05460.5prime Sequence
1122 bp (1007 high quality bases) assembled on 2009-07-06
> UFO05460.5prime
CAGTCGACATGGCAGCGGCACCCGAGTGGCTTACCCACGAATACATCGAG
CATGCACTTCGCTGCCACTACAAGGATGAAGGACTAACCATAACTCAGCT
GCAGATAAATCCCGCCCTGGGGCCTGGTGAAAACTACGGCGGAGTTCTGA
CCCGTGCTCGAGTGGAGTTCACACTGTCTAACAAGGAGAAAAATGTGCAG
AACCTGATTGTAAAGACGGAAATCGATGATGATGAGTTGACCCAGGAACT
GATGGCCCCATATGATATTTACAACCGCGAGATGACCATCTACCAGGAAG
TGCTGCCCAAATGCAGGGAGCTGCTTAATGAGATCGGAGATACTGAAAGG
ATATTTCCCACGGCCATCTATGTGGATCGCGAGCGTATGGCCATTATCTT
CGAAGATCTTTCTGTGGTGGGCTACGTAATGGCCGATCGAGTGCGTCGCC
TCAACGAGGAGCACACTCACCTCATCCTGCGCAAGTTGGCCAAATTCCAT
GCCGCCACAGCGGTCTTGAACGAGCGACAAAGTGGATGCCTCGAAAGTTA
CGATCGTGGTTTCTTTAATCGCTATACAAACGCCTACAGTGGCTACTTTG
TGGGTGGTCTGCTGGCCGCCGCTCGCTGGATGAGCAAGGTGCCCACGTTG
GCCCACTACGGAGAGAAGCTATTCGCTTTGGCTCCGCACTACATGGACAT
CGGCAGGGAGTGCTTTGCACCCACTCCGGGTCAAGTTAATGTTCTGGCCC
ATGGCGATGTGTGGACCAACAATGTGATGTTCAAGTACGATCCGAATACG
GGACGACCCGTCGATGTGCTGCTCATTGACTTCCAGTACTCCTTCTGGGG
CTCCCCATGCATCGATCTCCATCACCTGTTCATACTTCTCTAAGGAGCCA
CTGCGTAGAGATCAGCAGACGGGCTCTTCCAGTTCTACCACAGATATTCA
CTGAGACGTTAGAAAGCTCACTATCGTCAAAATCAGATTCCCAGTTGCAT
CAGTTTAAATGGAGGGTGAGCAAAGAGATTCTTTGCTCTGCAATCTACGG
TATCTGCAGCCAGTTATGAATAGCCCGATCCAGGATGCAGTTCATGCTGA
GTGAACGAGTATGACGGTGCCA
UFO05460.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:57:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10514-RA | 1358 | CG10514-RA | 39..1116 | 9..1075 | 5025 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:57:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25278773..25279808 | 1035..9 | 4700 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:57:48 has no hits.
UFO05460.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:18:57 Download gff for
UFO05460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10514-RA | 12..1105 | 9..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:47:57 Download gff for
UFO05460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10514-RA | 39..1132 | 9..1088 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:36:04 Download gff for
UFO05460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10514-RA | 39..1132 | 9..1088 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:36:04 Download gff for
UFO05460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25278773..25279808 | 9..1035 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:47:57 Download gff for
UFO05460.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21104495..21105530 | 9..1035 | 98 | | Minus |
