UFO05461.5prime Sequence
1091 bp (972 high quality bases) assembled on 2009-07-06
> UFO05461.5prime
CAGTCGACATGTTTACGAAAATCTTTCGCGCTGTGATAATCGGAGCCCCC
GGCTCGGGCAAAGGAACTATTTCGGAATTGATCTGCAAGAACCATGGATG
TGTGCACATCTCCACGGGGGACATTCTGCGCCAGAACATCATAAAAAACA
CAGAACTTGGAAAAAAGGCCAAGCAGTACATTGCTGAAGGTAAACTGGTG
CCCGACGCGATTGTGACCAAGACGATGCTGGCCCGGATAACCGAGGTAGG
CAACAGGTCGTACATCCTAGACGGATTCCCGCGCAATATAGCCCAGGCCG
AGGCACTGGCTGCACGCGAGCAAATCGATGCCGTGATCACGCTGGACGTT
CCACATAGTGTGATTATCGACCGGGTCAAGAATCGCTGGATCCATGCGCC
CTCCGGCAGGGTGTACAATATTGGCTTCAAGAATCCCAAAGTGCCTGGCA
AAGATGATGTGACGGGGGAGCCGCTGATGCAACGCGAAGATGATAAACCC
CATGTGGTGGCCAAGCGACTGGAGCTCTACGATGAGGTGATGAGCCCGGT
AATAGCCTGGTACGAAAAGAAGGGTCTGGTTGCCACTTTCAAGGGAAAAC
AGACAAAGGAGATCTGGCCGATGATGGAGCTTTTCCTCAACGACCGCATA
AATGCGGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCCAGGTAAG
TGGTCATAATCATAATCATAATCATAATCATAATCACAACTAGCCTAGGA
GATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAACGCCCGG
CGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGGTCATTAC
TGGATCTATCAACAGAGTCCAAGCGAGCTCGATATCAAATTACGCCCCGC
CCTGCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTCTGCCGACAT
GAAGCCATCACAAACGGCATGATGATCTGATCGCAGCGGCATCAGCACTT
GTCGCTTGCGATATATTTGCCCATGTGAACGGGGGCGAAAAAGTGTCTAT
TGCCACGGTTATCAACTGTGACTCACCAGATGGCTGAAGCA
UFO05461.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:26:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Adk3-RD | 1215 | CG6612-RD | 247..897 | 6..656 | 3255 | 100 | Plus |
| Adk3-RC | 1515 | CG6612-RC | 547..1197 | 6..656 | 3255 | 100 | Plus |
| Adk3-RA | 1301 | CG6612-RA | 554..1204 | 6..656 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:26:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10887663..10888313 | 656..6 | 3255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:26:18 has no hits.
UFO05461.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:20:13 Download gff for
UFO05461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk3-RA | 75..732 | 1..660 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:28:33 Download gff for
UFO05461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk3-RA | 550..1207 | 1..660 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:16:04 Download gff for
UFO05461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Adk3-RA | 550..1207 | 1..660 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:16:04 Download gff for
UFO05461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10887660..10888317 | 1..660 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:28:33 Download gff for
UFO05461.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6713382..6714039 | 1..660 | 99 | | Minus |
