UFO05484.5prime Sequence
1086 bp (958 high quality bases) assembled on 2009-07-06
> UFO05484.5prime
CAGTCGACATGCCCTCGGAAAACAGAATCAAAATCCTACCCAAGGCGGTG
GTCTGCGAGGAGAGCAGCCTGCGCGGTGACATCACCTTCTCGTCGGGCTG
TGTGGTTCATCCGAGTGCCACCGTTATCGCCGACGCAGGTCCCATAATAA
TTGGGGAGAATTGCATCATAGAGGAATATGCCACCGTAGCTCACCGCTTG
GAGCCGGGCGCCGTTTGGGATGTCAACAATATCCTGAGCATTGGCACTCA
CAATGTCTTTGAAGTCGGCTGCCAAGTGGAAGCGGCCAAGATTGGCGATA
AGAACGTCTTCGAGAGCAAGTGCTATGTGGGCCCCGGTGTCACTGTTTCC
AGCGGTTGTGTGGTGGGAGCTGGAATAAAGATCCATGGTAGTCAACGCCT
GCCCGAAAACACGATTGTTTATGGAGAGCAGGGCCTGCAGCGCGAGGCCA
TCGACAAGCAGGGATCGCAGACCCTGCAGATCGACTTCCTGCGCAAGGTC
CTGCCAAACTATCATCATCTACGCAAGCCCAACTACGATCCCAAGAAGGC
GCGCAGCGTGGTTGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGGGCCC
AGGTAAGTGGTCATAATCATAATCATAATCATAATCATAATCACAACTAG
CCTAGGAGATCCTGGTCATGACTAGTGCTTGGATTCTCACCAATAAAAAA
CGCCCGGCGGCAACCGAGCGTTCTGAACAAATCCAGATGGAGTTCTGAGG
TCATTACTGGATCTATCAACAGGAGTCCAAGCGAGCTCGATATCAAATTA
CGCCCCGCCCTGCCACTCATCGCAGTACTGTTGTAATTCATTAAGCATTC
TGCCGACATGGAAGCCATCACAAACGGCATGATGAACCTGAATCGCCAGC
GGCATCAGCACCTTGTCGCCTTGCGTATAAATATTTTGCCATGGTGAAAC
GGGGGCGAAGAAGTTGTCCATATTGTCCACGTTTAATCAAACTGGTGAAA
CTCACCCAAGATGCTGAAACGAAAAACATATTCTCATAACCTAAGTAAAT
AGCCAGCTTTTCACGGTAACCGCCATCTGCAATATT
UFO05484.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:45:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)37Ce-RA | 708 | CG17347-RA | 78..632 | 9..563 | 2775 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:45:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19132479..19133021 | 21..563 | 2715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:45:56 has no hits.
UFO05484.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 18:20:26 Download gff for
UFO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Ce-RA | 66..629 | 1..564 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:22 Download gff for
UFO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Ce-RA | 72..638 | 1..572 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:17:35 Download gff for
UFO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)37Ce-RA | 72..638 | 1..572 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:17:35 Download gff for
UFO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19132484..19133027 | 26..572 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:22 Download gff for
UFO05484.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19132484..19133027 | 26..572 | 99 | == | Plus |
